DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pex2 and Pex2

DIOPT Version :9

Sequence 1:NP_001156773.1 Gene:Pex2 / 19302 MGIID:107486 Length:305 Species:Mus musculus
Sequence 2:NP_648210.1 Gene:Pex2 / 38941 FlyBaseID:FBgn0035876 Length:281 Species:Drosophila melanogaster


Alignment Length:304 Identity:90/304 - (29%)
Similarity:150/304 - (49%) Gaps:38/304 - (12%)


- Green bases have known domain annotations that are detailed below.


Mouse     8 MQSANRVLRISQLDALELNKALEQLVWSQFTQCFHGFKPGLLARFEPEVKAFLWLFLWRFTIYSK 72
            |:....|.|::|:||:.|||.:.:|:.....:......|.|..:.:||:...:...:|..::..:
  Fly     1 MEKNKYVPRVNQIDAIYLNKDIARLIRDNLLENLQAISPVLFIKIQPELDLIIQSAIWFGSVGKR 65

Mouse    73 NATVGQSVLNIQYKND--SSLNLIYQPPSKTQKLWYAVCTIGG---KWLEERCYDLFRNRHLASF 132
            .:|.||.:|.:.|..:  :...|:         |.:.:..:.|   .|.|.|.     .|.:..|
  Fly    66 CSTFGQQLLVLAYDAEKLTVSRLV---------LHFILTVLPGYVKSWEERRL-----TRRVEWF 116

Mouse   133 GKAKQFMNFLVGLLKLGELINFLIFLQKGKFATLTERLLGIHSVFCKPQNMREVGFEYMNRELLW 197
            .:|..::.....:|   .::|:..||:.|:..||.:.|||:..:..:....|::|::|:.|||||
  Fly   117 SEAIMWVENSALIL---NILNYFRFLKTGRKPTLVDYLLGLDYISLRNNQRRDIGYKYLTRELLW 178

Mouse   198 HGFAEFLIFLLPLINIQKLKAKLSSWCIPLTGAAGHDS--------TLGSSGKECALCGEWPTMP 254
            .||.|.|..:||:||.:||:..|.||..........|.        ||.::   |..|||.||:|
  Fly   179 GGFMEILGLVLPIINFRKLQRVLKSWTFSGRRLEDRDGPAFLAPQMTLSTT---CTFCGERPTLP 240

Mouse   255 HTIGCEHVFCYYCVKSSFLFDIYFTCPKCGTEVHSVQPLKSGIE 298
            |.:||.|::||||:.::.|.|..|.||.||    |..| :|||:
  Fly   241 HHMGCGHIYCYYCLNANVLTDASFCCPNCG----SACP-ESGIQ 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pex2NP_001156773.1 Pex2_Pex12 27..224 CDD:398431 51/201 (25%)
RING-HC_PEX2 243..284 CDD:319440 20/40 (50%)
Pex2NP_648210.1 Pex2_Pex12 22..207 CDD:282595 46/189 (24%)
RING 230..269 CDD:214546 17/38 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849083
Domainoid 1 1.000 76 1.000 Domainoid score I8992
eggNOG 1 0.900 - - E1_KOG2879
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H269
Inparanoid 1 1.050 140 1.000 Inparanoid score I4492
Isobase 1 0.950 - 0.721928 Normalized mean entropy S4319
OMA 1 1.010 - - QHG53949
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005881
OrthoInspector 1 1.000 - - oto94256
orthoMCL 1 0.900 - - OOG6_103635
Panther 1 1.100 - - LDO PTHR23350
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5623
SonicParanoid 1 1.000 - - X5660
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.740

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