DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptprt and Ptp36E

DIOPT Version :9

Sequence 1:XP_017172075.1 Gene:Ptprt / 19281 MGIID:1321152 Length:1487 Species:Mus musculus
Sequence 2:NP_001286033.1 Gene:Ptp36E / 35091 FlyBaseID:FBgn0267486 Length:682 Species:Drosophila melanogaster


Alignment Length:599 Identity:198/599 - (33%)
Similarity:318/599 - (53%) Gaps:49/599 - (8%)


- Green bases have known domain annotations that are detailed below.


Mouse   915 FKEEYEALPEGQTASWDTAKEDENRNKNRYGNIISYDHSRVRLLVLDGDPHSDYINANYIDGYHR 979
            :|.|::...:.::.:...|.:..|..||:....|.||::||.|..:.|...|||:||:|:|...:
  Fly   102 YKLEFQTAAKVESNTCRHALKKNNLEKNQNPKCIPYDYNRVVLEKVGGLQDSDYVNASYVDSLLK 166

Mouse   980 PRHYIATQGPMQETVKDFWRMIWQENSASIVMVTNLVEVGRHPAEHTVGTATLGRAASPGMVKCV 1044
            |..||.||||::|||:.:|||:||||.::|||:|...:..:                    |.|.
  Fly   167 PNAYIVTQGPVEETVQAYWRMVWQENISAIVMLTKTFDFAK--------------------VMCH 211

Mouse  1045 RYWPDDTEV---YGDIKVTLIETEPLAEYVIRTFTVQKKG-YHEIRELRL---FHFTSWPDHGVP 1102
            :|||.:.||   ||||.:.::..|.||.:.||||.:.|.. ..|:.:.||   ||:|.|..|..|
  Fly   212 QYWPPNMEVHEQYGDIFINIVREEQLANFHIRTFRLYKMNEKQEVTDERLILQFHYTEWYSHSCP 276

Mouse  1103 CYATGLLGFVRQVKFL-------NPPEAGPIVVHCSAGAGRTGCFIAIDTMLDMAENEGVVDIFN 1160
             ::..||.|.|:|:.:       .....|||:||||.|.||:|.:::||..|::||.|...::|.
  Fly   277 -FSNALLEFRRRVRLVVGNIIKDEDDMRGPILVHCSDGGGRSGVYMSIDANLELAEEEECFNVFG 340

Mouse  1161 CVRELRAQRVNLVQTEEQYVFVHDAILEACLCGNTAIPVCEFRSLYYNISRLDPQTNSSQIKDEF 1225
            .:::||..|..||:..|||.|::|.:.|..:||.|..||.|........:|.:..|..::.:.|:
  Fly   341 YLKKLRQSRKGLVENVEQYKFIYDTLEEHIICGKTWFPVSELSDRLKAKARRNSGTKMNEYQAEY 405

Mouse  1226 QTLNIVTPRVRPEDCSIGLLPRNHDKNRSMDVLPLDRCLPFLISVDGES-SNYINAALMDSHKQP 1289
            ..:...|||....||:.|....|.:|||.:..:|.|...|:|.|..|.: ::|||:..:|.:.:|
  Fly   406 DQICKQTPRFTIGDCAGGHRADNREKNRDVLCVPPDNFRPYLTSFQGNAFTDYINSVFVDGYTKP 470

Mouse  1290 AAFVVTQHPLPNTVADFWRLVFDYNCSSVVMLNEMDT-AQLCMQYWPEKTS-GCYGPI-QVEFVS 1351
            ..::||:.|:.:|:.:||.||:|..||:||:|.:..: :|....:||.|:. ..|||: .|.:|.
  Fly   471 REYIVTEWPMKHTLGEFWSLVYDQECSAVVVLCQPPSQSQQYPSFWPNKSKMEKYGPVFSVHYVM 535

Mouse  1352 ADIDEDIIHRIFRICN--------MARPQDGYRIVQHLQYIGWPAYRDTPPSKRSLLKVVRRLEK 1408
            :....:|....|:|..        ||..:...|.||..|...||.....|.|..||:.::..:|.
  Fly   536 SKSYTNIKQWEFKINKKIVSLTEMMAGVKAPTRTVQLFQLTCWPMGHKVPSSTNSLVYLMNMVEI 600

Mouse  1409 WQEQYDGREGRTVVHCLNGGGRSGTFCAICSVCEMIQQQNIIDVFHIVKTLRNNKSNMVETLEQY 1473
            |:.:.|  .|...|...:|..|:|.:||..:..|.:.|...:|||..|||:|.::..:||.:.:|
  Fly   601 WRNKVD--YGPVCVVSPDGRSRAGVYCAANACIEQVIQHGEVDVFQAVKTVRRHRPQLVENMTEY 663

Mouse  1474 KFVYEVALEYLSSF 1487
            |:.|::.|.|:..|
  Fly   664 KYCYDLVLHYVLHF 677

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PtprtXP_017172075.1 MAM 36..193 CDD:214533
fn3 298..364 CDD:365830
FN3 394..484 CDD:238020
fn3 506..581 CDD:365830
R-PTPc-T-1 936..1192 CDD:350478 100/269 (37%)
R-PTPc-T-2 1277..1482 CDD:350482 67/215 (31%)
Ptp36ENP_001286033.1 Y_phosphatase 125..368 CDD:395053 99/263 (38%)
Y_phosphatase 428..671 CDD:395053 77/244 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4228
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000829
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.770

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