Sequence 1: | XP_006523937.1 | Gene: | Ptprs / 19280 | MGIID: | 97815 | Length: | 1920 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001162669.1 | Gene: | Ptp4E / 31425 | FlyBaseID: | FBgn0004368 | Length: | 1767 | Species: | Drosophila melanogaster |
Alignment Length: | 1812 | Identity: | 417/1812 - (23%) |
---|---|---|---|
Similarity: | 650/1812 - (35%) | Gaps: | 491/1812 - (27%) |
- Green bases have known domain annotations that are detailed below.
Mouse 113 VGEITI----HAKLTVL---------------REDQLPP-GFPN-------IDMGPQLK---VVE 147
Mouse 148 RTRTATMLCAASGNPDPEITWFKDFLPV-DPSASNGRIKQLRSGALQIESSEETDQGKYECVATN 211
Mouse 212 SAGVRYSSPANLYVRELREVRRVAPRFSILPMSHEIMPGGNVNITCVAV---------------- 260
Mouse 261 --GSPMPYVKWMQGAEDL--------------------TPEDDM-----------PVG------- 285
Mouse 286 -------RNVLELTDVKDSANYTCVAMSSLGVIEAVAQITVKSLPKAPGTPVVTENTATSITVTW 343
Mouse 344 DSGNPDPVSYYVIEYKSKSQDGPYQIKEDITTTR------YSIGG----------LSPNSEYEIW 392
Mouse 393 VSAV-NSIGQGPPSESVVTRTGEQAPASAPRNVQARMLS------ATTMIVQWEEPVEPNGLIRG 450
Mouse 451 YRVYY-----TMEPEHPVGNWQKHNVDDSLLT-TVGSLLEDETYTVRVLAFTSVGDGPLSDPIQV 509
Mouse 510 KTQQGVPGQPMNLRAEAKS-ETSIGLSWSAPRQESVIKYELLF-REGDRGREVGRTFDPTTAFVV 572
Mouse 573 EDLKPNTEYAFRLAARSPQGLGAFTAVVRQRT---LQAKPSAPPQDVKCTSLRSTAILVSWRPPP 634
Mouse 635 PETHNGALVGYSVRYR-----------------------------------PLGSEDPDPKEVN- 663
Mouse 664 NIPPTTTQILLEALE------KWTEYRVTAVAYTEVGPGPESS---------PVVVRTDEDVPSA 713
Mouse 714 PPRKVEAEALNATAIRVLWRSPTPGRQH--------GQIRGYQVH-------------YVRMEGA 757
Mouse 758 E--------------------------ARGPPRIKDIMLADAQWEMDDTAEYEMVITNLQPETAY 796
Mouse 797 SITVAAYTMKGDGARSKPKVVVTKGAVLGRPTLSVQQTPEGSLLARWEPPADAAEDPVLGYRLQF 861
Mouse 862 -GREDAAPATLELAAWERRFA----APAHKGATYVFRLAARGRAGLGEEAA---AALSIPEDAP- 917
Mouse 918 -RGFPQILGAAG--------NVSAGSVLLRWLPPVPAERNGAIIKYTVSVREAGAPGPATETELA 973
Mouse 974 AAAQPGAETALTLRGLRPETAYELRVRAHTRRGPGPFSPPLRYRLARDPVSPKNFKVKMIMKTSV 1038
Mouse 1039 LLSWEFPDNYNSPTPYKIQYNGLTLDVDGRTTKKLITHLKPHTFYNFVLTNRGSSLGGLQ----Q 1099
Mouse 1100 TVTARTAFNMLSGKPSVAPKPDNDGFIVVYLPDGQSPVTVQNYFIVMVPLRKSRGGQFPVLLGSP 1164
Mouse 1165 EDMDLEELIQDISRLQRRSLRHSRQLEVPRPYIAARFSILPAVFHPGNQKQYGGFDNRGLEPGHR 1229
Mouse 1230 YVLFVLAVLQKNEPTFAASPFSDPFQLDNPDPQPIVDGEEGLIWVIGPVLAVVFIICIVIAILLY 1294
Mouse 1295 KNKPDSKRKDSEPRTKCLLNNADLAPHHPKDPVEMRRINFQTPGMLSHPPIPITDMAEHMERLKA 1359
Mouse 1360 NDSLKLSQEYESI-DPGQQFTWEHSNLEANKPKNRYANVIAYDHSRVILQPLEGIMGSDYINANY 1423
Mouse 1424 VDGYRRQNAYIATQGPLPETFGDFWRMVWEQRSATVVMMTRLEEKSRIKCDQYWP-NRGTETYGF 1487
Mouse 1488 IQVTLLDTMELATFCVRTFSLHKNGSSEKREVRHFQFTAWPDHGVPEYPTPFLAFLRRVKTCNPP 1552
Mouse 1553 DAGPIVVHCSAGVGRTGCFIVIDAMLERIKTEKTVDVYGHVTLMRSQRNYMVQTEDQYGFIHEAL 1617
Mouse 1618 LEAVGCGNTEVPARSLYTYIQKLAQVEPGEHVTGMELEFKRLASSKAHTSRFITASL 1674 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ptprs | XP_006523937.1 | I-set | 33..124 | CDD:400151 | 6/14 (43%) |
Ig strand A | 33..36 | CDD:409353 | |||
Ig strand A' | 42..45 | CDD:409353 | |||
Ig strand B | 50..57 | CDD:409353 | |||
Ig strand C | 63..68 | CDD:409353 | |||
Ig strand C' | 71..73 | CDD:409353 | |||
Ig strand D | 80..84 | CDD:409353 | |||
Ig strand E | 86..93 | CDD:409353 | |||
Ig strand F | 103..111 | CDD:409353 | |||
Ig strand G | 114..124 | CDD:409353 | 5/13 (38%) | ||
IgI_2_RPTP_IIa_LAR_like | 137..226 | CDD:409400 | 18/92 (20%) | ||
Ig strand B | 152..156 | CDD:409400 | 0/3 (0%) | ||
Ig strand C | 165..169 | CDD:409400 | 1/3 (33%) | ||
Ig strand E | 190..194 | CDD:409400 | 0/3 (0%) | ||
Ig strand F | 204..209 | CDD:409400 | 1/4 (25%) | ||
Ig strand G | 216..219 | CDD:409400 | 0/2 (0%) | ||
IgI_3_RPTP_IIa_LAR_like | 239..320 | CDD:409401 | 21/143 (15%) | ||
Ig strand B | 253..257 | CDD:409401 | 0/3 (0%) | ||
Ig strand C | 266..270 | CDD:409401 | 0/3 (0%) | ||
Ig strand E | 287..291 | CDD:409401 | 1/3 (33%) | ||
Ig strand F | 299..304 | CDD:409401 | 0/4 (0%) | ||
Ig strand G | 312..315 | CDD:409401 | 1/2 (50%) | ||
FN3 | 323..412 | CDD:238020 | 20/105 (19%) | ||
FN3 | 419..511 | CDD:238020 | 25/103 (24%) | ||
FN3 | 516..604 | CDD:238020 | 23/89 (26%) | ||
FN3 | 612..706 | CDD:238020 | 22/144 (15%) | ||
FN3 | 714..819 | CDD:238020 | 28/151 (19%) | ||
FN3 | 929..1017 | CDD:238020 | 20/87 (23%) | ||
FN3 | 1022..1105 | CDD:238020 | 15/86 (17%) | ||
PTP_tm | <1211..1295 | CDD:408631 | 14/83 (17%) | ||
R-PTPc-S-1 | 1342..1623 | CDD:350473 | 126/282 (45%) | ||
R-PTP-S-2 | 1625..1914 | CDD:350475 | 15/50 (30%) | ||
Ptp4E | NP_001162669.1 | FN3 | 151..242 | CDD:238020 | 18/100 (18%) |
fn3 | 247..328 | CDD:278470 | 11/80 (14%) | ||
fn3 | 343..417 | CDD:278470 | 19/97 (20%) | ||
fn3 | 443..525 | CDD:278470 | 20/86 (23%) | ||
FN3 | 548..611 | CDD:238020 | 18/72 (25%) | ||
FN3 | 620..706 | CDD:238020 | 16/89 (18%) | ||
fn3 | 708..796 | CDD:278470 | 18/105 (17%) | ||
fn3 | 824..886 | CDD:278470 | 13/70 (19%) | ||
fn3 | 902..978 | CDD:278470 | 16/82 (20%) | ||
fn3 | 1013..1092 | CDD:278470 | 21/93 (23%) | ||
UP_III_II | 1106..>1248 | CDD:297589 | 39/215 (18%) | ||
PTPc | 1329..1582 | CDD:214550 | 117/254 (46%) | ||
PTPc | 1355..1582 | CDD:238006 | 110/228 (48%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3031 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.940 |