Sequence 1: | XP_036021846.1 | Gene: | Ptpro / 19277 | MGIID: | 1097152 | Length: | 1261 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001260594.1 | Gene: | Lar / 35259 | FlyBaseID: | FBgn0000464 | Length: | 2032 | Species: | Drosophila melanogaster |
Alignment Length: | 1332 | Identity: | 297/1332 - (22%) |
---|---|---|---|
Similarity: | 488/1332 - (36%) | Gaps: | 440/1332 - (33%) |
- Green bases have known domain annotations that are detailed below.
Mouse 111 STLPPPVV---FKATYHGLYYI---------------ITLVVVN--------------GNVVTKP 143
Mouse 144 SRSITVL-------------TKPLPVTSVSIY-DYKPSPE---TGVL--FEIHYPEKYNVFSRVN 189
Mouse 190 ISYWEGRDFRTMLYKDFFKGKTVFNHWLPGLCYSNITFQLVSEATFNKSTL-------VEYSGVS 247
Mouse 248 HEPKQHRTAPY---PPRNISVR-FVNLN----------KNNWEEPSGSFPE-------------- 284
Mouse 285 --DSFIKPPQ------DSIGRDRRFHFPE----------------ETPETPPSNVSSGSPPSNVS 325
Mouse 326 SAWPDPNSTDYESTSQPFWWDSASAAPENEEDFVSALPADYDTE--TTLDR---TEKPTADPFSA 385
Mouse 386 FPVQMTLSWLPPKPPTAFDGFNILIEREENFTDYLTVDEEAHEFVAELKEPGKYKLSVTTFSSSG 450
Mouse 451 A--------CETRKSQSAKSLSFYISPTGE-----WIEELTEKPQHVSVHVLSSTTALMSWTSSQ 502
Mouse 503 ENYNSTIVSVVSLTCQKQKESQRLEKQYCTQVNSSKPVIENLVPGAQYQVVMYLRKGPLIGPPSD 567
Mouse 568 PVTFAIVPTGIK-DLMLYPLGPTAVVLSWTRPI-------------LGVF-------------RK 605
Mouse 606 YVVEMFYFNPTTMT--SEWTTYYEIAATVSLTASVRIASLLPAWYYN--FRVTMVTWGDPELSCC 666
Mouse 667 DSSTISFITAP---VAPEITSVEYFNSLLYI----SWTYGDATTDLSHSRMLHWMVVAEGRKKIK 724
Mouse 725 KSVTRNVMTAILSLPPGDIYNLSVTACTERGSNTSLPRLVKLEPAPPKSLFAVNK-TQTSVTLLW 788
Mouse 789 VEEGVADFFEVFCQQLGSGH------NGKLQEPVAVSSHVVTISSLLPATAYNCSVTS--FSHD- 844
Mouse 845 ------------TPSVPTFIAVSTMVTEVNPNVVVISVLAILSTLLIGLLLVTLVILRKKHLQ-- 895
Mouse 896 -----------MARECGAGTFVNFASLEREGKLPYSWRRSVFALLTLLPSCLWTDYLLAFYINPW 949
Mouse 950 SKNGLKKRKLTNPVQLDDFDSYIKDMAKDSDYKFSLQFEELKLIGLDIPHFAADLPLNRCKNRYT 1014
Mouse 1015 NILPYDFSRVRLVSMNEEEGADYINANYIPGYNSPQEYIATQGPLPETRNDFWKMVLQQKSHIIV 1079
Mouse 1080 MLTQCNEKRRVKCDHYWPFTEEPIAYGDITVEMVSEEEEEDWASRHFRI--NYADEAQDVMHFNY 1142
Mouse 1143 TAWPDHGVP--PANAAESILQFVFTVRQQAAKSKGPMIIHCSAGVGRTGTFIALDRLLQHIRDHE 1205
Mouse 1206 FVDILGLVSEMRSYRMSMVQTEEQYIFIHQCV 1237 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ptpro | XP_036021846.1 | FN3 | 479..571 | CDD:238020 | 19/91 (21%) |
FN3 | 575..675 | CDD:238020 | 19/130 (15%) | ||
fn3 | 770..850 | CDD:394996 | 19/101 (19%) | ||
R-PTPc-O | 996..1240 | CDD:350462 | 105/246 (43%) | ||
Lar | NP_001260594.1 | Ig | 35..129 | CDD:299845 | |
I-set | 36..129 | CDD:254352 | |||
IG_like | 146..227 | CDD:214653 | |||
Ig | 159..228 | CDD:299845 | |||
I-set | 234..318 | CDD:254352 | |||
Ig3_RPTP_IIa_LAR_like | 249..317 | CDD:143216 | |||
fn3 | 324..404 | CDD:278470 | |||
FN3 | 423..514 | CDD:238020 | |||
FN3 | 520..610 | CDD:238020 | |||
FN3 | 616..707 | CDD:238020 | 13/73 (18%) | ||
FN3 | 712..810 | CDD:238020 | 23/129 (18%) | ||
FN3 | 832..907 | CDD:238020 | 9/74 (12%) | ||
FN3 | 914..1005 | CDD:238020 | 24/147 (16%) | ||
FN3 | 1012..1101 | CDD:238020 | 26/115 (23%) | ||
fn3 | 1106..1198 | CDD:278470 | 16/102 (16%) | ||
PTPc | 1476..1731 | CDD:214550 | 110/260 (42%) | ||
PTPc | 1503..1731 | CDD:238006 | 103/232 (44%) | ||
PTPc | 1763..2022 | CDD:214550 | |||
PTPc | 1791..2022 | CDD:238006 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3031 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.030 |