DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptprm and CG42327

DIOPT Version :10

Sequence 1:NP_001344554.1 Gene:Ptprm / 19274 MGIID:102694 Length:1486 Species:Mus musculus
Sequence 2:NP_001036706.2 Gene:CG42327 / 41401 FlyBaseID:FBgn0259227 Length:1429 Species:Drosophila melanogaster


Alignment Length:1329 Identity:266/1329 - (20%)
Similarity:448/1329 - (33%) Gaps:370/1329 - (27%)


- Green bases have known domain annotations that are detailed below.


Mouse    55 TKPTSDPWMPSGSFMLVNTSGKPEGQRAHLLLPQLKENDTHCIDFHYFVSSKSNAAPGLLNVYVK 119
            |..||.| :|:.:....:.....|...:...:.||.|....      |:|..|..|..|      
  Fly   294 TTSTSTP-LPTTAVSFASNENVIEESTSKSEVRQLPEKRAK------FISENSTNAQQL------ 345

Mouse   120 VNNGPLGNPIWNISGDPTRTWHRAELAISTFWP--NFYQVIFEV-----VTSGHQGYLAIDEVKV 177
              ..|....:|:::|  .:...:|.|..:|..|  |...:..::     .|..|:....:|.:.:
  Fly   346 --TLPNTAEVWSLAG--MKAVPKAPLTTTTSVPLLNHTDLANDIDMPLNKTELHKEKNLLDWMNI 406

Mouse   178 LGHPCT---RTPHFLRIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSR 239
            ...|.|   ||...:|   ..::|.:.||   .|....:..:......|.|   .|::..||::|
  Fly   407 AMLPLTPENRTEFVVR---TTLDATEGAT---QATTEALVEETHSKSDITV---GLEQDNVTTAR 462

Mouse   240 RFIAS-------FNVVNTTKR-------------DAGKYRCMIC-------TEGGVGISNYAELV 277
            ...::       .|:..||.|             ||...:.:..       ||.....:.:..| 
  Fly   463 TMPSTPDPGSMDLNMTTTTVRTQQLEVPLVKKMSDAANAKLIEAVTEPQRETEAATEAATFVTL- 526

Mouse   278 VKEPPVPIAPPQLASVGATYLWIQLNANSINGDGPIVAREVEYCTASGSWNDRQPVDSTS----- 337
                     |.:||:.|.|..........:|......|.|....:.:.|.:....:.||:     
  Fly   527 ---------PEKLATFGITARVDSTQTELLNVTTAAAATESGEMSKANSTDTLSAMTSTTTTTAR 582

Mouse   338 -YKIGHLDPDTEYEISVLLTRPGEGGTGSPGPALRTRTKCADPMRGPRKLEVVEVKSRQITIRWE 401
             ..:.|:.|:.:.|.:..|.......:|:...|..:.|..|.|           |.|...|....
  Fly   583 PMSVEHVTPEQDMEAATSLATTAATSSGTTEAAATSSTTAATP-----------VVSEAATAAEA 636

Mouse   402 PFGYNVTRCHSYNL------TVHYGYQVGGQEQVREEVSWDTDNSHPQHTITNLSPYTNVSVKLI 460
            ......|...:.::      |.....:......:|::   :.|||:.....|...|.:..:....
  Fly   637 SATSEATTAATLSVATTAASTTEIAMKATQISNIRDD---NDDNSNDVIVATTKFPESEQAATTA 698

Mouse   461 LMNPEGRKESQELTVQTDEDLPGAVPTESIQGSAFEEKIF------LQWREPTQT-----YGVIT 514
            .:.|    .:..::|:...::..::..|.|..|.....|.      .....||||     ...:.
  Fly   699 SVEP----TTTSVSVRVAGEVSTSIRPEIIVTSTRNSTIVDTSTSATSVATPTQTEIAQISNEVN 759

Mouse   515 LYEITYKAVSSFDPEIDLSNQSGRVSKLGNETHFLFFGLYPGTTYSFTIRASTAKGFGPPATNQF 579
            |..:|.|.........:|.......:.:.|..         ..|.|.....:||....|..||..
  Fly   760 LEAVTVKTRDGLSDTNELRTAEKTDNAVNNSV---------AITESDLGALATAVETNPTTTNSL 815

Mouse   580 TTKISAPSMPAYEFETPLNQTDN-------------TVTVMLKPAQSRGAPVSV----------- 620
            .:.:|..|.   |.|:.| :|:|             ..||.:...:|..||.:.           
  Fly   816 LSDVSKLSK---EHESSL-ETNNIGEAPPESTTPAAPATVAVATDESTAAPAATGGQEIVREGQH 876

Mouse   621 ---YQIVVEEERPRRTKKTTEILKCYPVPIHFQNASILNSQYYFAAEFP--ADSLQAAQPFTIGD 680
               .|:..|::..::..|||..:............|...:    ..|.|  ..::|..:...:.|
  Fly   877 HDGQQVADEQDTEQQLAKTTMAVTTTTTSATTTTTSTTTT----TTETPLTTTTMQPVEISLLDD 937

Mouse   681 NKTYNGYWNTPLLPHKSYRIYYQAASRANGETKIDCVRVATKAAIIVTQLTTPYIRIAPAAGDGQ 745
            :.|..  ..||..|     :|:::               :|.|:..:...||    :.|     :
  Fly   938 STTTT--TTTPAPP-----VYFES---------------STVASTTIRSSTT----MLP-----E 971

Mouse   746 LTGAVTPKP--------VPEPEKQTDH------------------TVKIAGVIAGILLFVIIFLG 784
            .|.|.|..|        .|.| .:.||                  ||.:.||:|.|||...::| 
  Fly   972 TTTASTQSPSEMPPTFMAPYP-NELDHMQTNAQDNGTDVNVIIAITVSVIGVVALILLVAFLYL- 1034

Mouse   785 VVLVMKKRKLAKKRKETMSSTR-QEMTVMVNSMDKSYAEQGTNCDEAFSFMGTHNLNGRSVSSPS 848
                     :.|::|:|....| :.:::...|:|.            .|.:|:....||.:.:. 
  Fly  1035 ---------MRKRQKQTSYGQRCRPVSLDAYSLDN------------VSVLGSVRRKGRDMRAS- 1077

Mouse   849 SFTMKTNTLSTSVPNSYYPDPFVPTAILDETHTMASDTSSLAQPHTYKKREAADVPYQTGQLHPA 913
                     ..:..|:.:.||                  ||.                    |..
  Fly  1078 ---------KRTYGNAAFDDP------------------SLR--------------------HNL 1095

Mouse   914 IRVADLLQHITQMKCAEGYGFKEEYESFFEGQSAPWDSAKKDE----NRMKNRYGNIIAYDHSRV 974
            :..::|.:.:           :...:.|.|.:..|...|:.||    ...||||.|:|....:||
  Fly  1096 LTASELARFV-----------ERRSDVFEEFRDVPQIIARADEVPPGCEDKNRYANVIPLPETRV 1149

Mouse   975 RLQMLEGDNNSDYINGNYIDG-YHRPNHYIATQGPMQETIYDFWRMVWHENTASIIMVTNLVEVG 1038
            .||....|:.::|||.||:.| ...||:|||.|.|::.|..|||||:|.:.:..||..|:|.|.|
  Fly  1150 VLQRQGDDDKTEYINANYVRGPRDAPNYYIACQAPLESTTSDFWRMIWEQQSRVIIQATDLSENG 1214

Mouse  1039 RVKCCKYWP-----DDTEIYKDIKVTLIDTELLAEYVIRTFAVEKRGIHEIREIRQFHFTGWPDH 1098
            ..:|.:|.|     |:...|.|.:|||...|:...|.|.|..:::....|.||:..:.:. ||:.
  Fly  1215 IERCAEYLPPSATLDNHSSYGDYQVTLKHREVKDRYAISTLVLKRVDGEESRELTHYWYK-WPEA 1278

Mouse  1099 GVPYHATGLLGFVRQVKSK---------------------------------------------- 1117
            |||.....::..:.:.:|.                                              
  Fly  1279 GVPAEEAPIIAMLLEARSSLKSYSLEQANELREKSATLETSMDADGSKAEAGSTSSHEINGNISS 1343

Mouse  1118 ---SPPNAGPLVVHCSAGAGRTGCFIVIDIMLDMAER-EGVVDIYNCVRELRSRRVNMVQTEEQY 1178
               :....|||.||||.|.||||..|..|:.:...|. :..|||...|..:|..|.:.|||:|||
  Fly  1344 RSGTRSQQGPLTVHCSPGTGRTGTIIASDMAIRSLETPKRSVDIPQLVYYVRRGRASAVQTKEQY 1408

Mouse  1179 VFIHDAILEACLCGDTSIPASQVRSLYYD 1207
            .||:..         .|:.|:::.:|..|
  Fly  1409 EFIYKV---------ASMYAAKITNLSND 1428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PtprmNP_001344554.1 MAM 22..182 CDD:214533 25/133 (19%)
ig 192..274 CDD:395002 18/108 (17%)
FN3 <266..>638 CDD:442628 70/421 (17%)
fn3 499..574 CDD:394996 14/85 (16%)
R-PTPc-M-1 918..1190 CDD:350481 95/331 (29%)
R-PTPc-M-2 1276..1481 CDD:350483
CG42327NP_001036706.2 PTPc 1134..1415 CDD:214550 88/290 (30%)
Blue background indicates that the domain is not in the aligned region.

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