DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptprm and Ptp36E

DIOPT Version :9

Sequence 1:NP_001344554.1 Gene:Ptprm / 19274 MGIID:102694 Length:1486 Species:Mus musculus
Sequence 2:NP_001286033.1 Gene:Ptp36E / 35091 FlyBaseID:FBgn0267486 Length:682 Species:Drosophila melanogaster


Alignment Length:643 Identity:202/643 - (31%)
Similarity:336/643 - (52%) Gaps:64/643 - (9%)


- Green bases have known domain annotations that are detailed below.


Mouse   892 PHTYK--------------KREAAD--------VPYQTGQLHPAIRVADLLQHITQMKCAEGYGF 934
            |:|.|              |.||.|        :|.....:...:::.||.:....:       :
  Fly    45 PNTIKLSMLNSGLLSFERIKLEARDENNSLSKTIPNGPIDIRHFLKLCDLRRKFPVL-------Y 102

Mouse   935 KEEYESFFEGQSAPWDSAKKDENRMKNRYGNIIAYDHSRVRLQMLEGDNNSDYINGNYIDGYHRP 999
            |.|:::..:.:|.....|.|..|..||:....|.||::||.|:.:.|..:|||:|.:|:|...:|
  Fly   103 KLEFQTAAKVESNTCRHALKKNNLEKNQNPKCIPYDYNRVVLEKVGGLQDSDYVNASYVDSLLKP 167

Mouse  1000 NHYIATQGPMQETIYDFWRMVWHENTASIIMVTNLVEVGRVKCCKYWPDDTEI---YKDIKVTLI 1061
            |.||.||||::||:..:|||||.||.::|:|:|...:..:|.|.:|||.:.|:   |.||.:.::
  Fly   168 NAYIVTQGPVEETVQAYWRMVWQENISAIVMLTKTFDFAKVMCHQYWPPNMEVHEQYGDIFINIV 232

Mouse  1062 DTELLAEYVIRTFAV----EKRGIHEIREIRQFHFTGWPDHGVPYHATGLLGFVRQVK------- 1115
            ..|.||.:.||||.:    ||:.:.:.|.|.|||:|.|..|..|: :..||.|.|:|:       
  Fly   233 REEQLANFHIRTFRLYKMNEKQEVTDERLILQFHYTEWYSHSCPF-SNALLEFRRRVRLVVGNII 296

Mouse  1116 SKSPPNAGPLVVHCSAGAGRTGCFIVIDIMLDMAEREGVVDIYNCVRELRSRRVNMVQTEEQYVF 1180
            .......||::||||.|.||:|.::.||..|::||.|...:::..:::||..|..:|:..|||.|
  Fly   297 KDEDDMRGPILVHCSDGGGRSGVYMSIDANLELAEEEECFNVFGYLKKLRQSRKGLVENVEQYKF 361

Mouse  1181 IHDAILEACLCGDTSIPASQVRSLYYDMNKLDPQTNSSQIKEEFRTLNMVTPTLRVEDCSIALLP 1245
            |:|.:.|..:||.|..|.|::........:.:..|..::.:.|:..:...||...:.||:.....
  Fly   362 IYDTLEEHIICGKTWFPVSELSDRLKAKARRNSGTKMNEYQAEYDQICKQTPRFTIGDCAGGHRA 426

Mouse  1246 RNHEKNRCMDILPPDRCLPFLITIDGES-SNYINAALMDSYKQPSAFIVTQHPLPNTVKDFWRLV 1309
            .|.||||.:..:|||...|:|.:..|.: ::|||:..:|.|.:|..:|||:.|:.:|:.:||.||
  Fly   427 DNREKNRDVLCVPPDNFRPYLTSFQGNAFTDYINSVFVDGYTKPREYIVTEWPMKHTLGEFWSLV 491

Mouse  1310 LDYHCTSVVML-NDVDPAQLCPQYWP-ENGVHRHGPI-QVEFVSA-----------DLEEDIISR 1360
            .|..|::||:| .....:|..|.:|| ::.:.::||: .|.:|.:           .:.:.|:|.
  Fly   492 YDQECSAVVVLCQPPSQSQQYPSFWPNKSKMEKYGPVFSVHYVMSKSYTNIKQWEFKINKKIVSL 556

Mouse  1361 IFRIYNASRPQDGHRMVQQFQFLGWPMYRDTPVSKRSFLKLIRQVDKWQEEYNGGEGRTVVHCLN 1425
            ...:.....|.   |.||.||...|||....|.|..|.:.|:..|:.|:.:.:  .|...|...:
  Fly   557 TEMMAGVKAPT---RTVQLFQLTCWPMGHKVPSSTNSLVYLMNMVEIWRNKVD--YGPVCVVSPD 616

Mouse  1426 GGGRSGTFCAISIVCEMLRHQRTVDVFHAVKTLRNNKPNMVDLLDQYKFCYEVALEYL 1483
            |..|:|.:||.:...|.:.....||||.||||:|.::|.:|:.:.:||:||::.|.|:
  Fly   617 GRSRAGVYCAANACIEQVIQHGEVDVFQAVKTVRRHRPQLVENMTEYKYCYDLVLHYV 674

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PtprmNP_001344554.1 MAM 22..182 CDD:214533
ig 192..274 CDD:278476
FN3 282..361 CDD:214495
FN3 383..467 CDD:214495
fn3 499..574 CDD:306538
PTPc 933..1187 CDD:214550 99/267 (37%)
PTPc 1249..1481 CDD:238006 78/246 (32%)
Ptp36ENP_001286033.1 Y_phosphatase 125..368 CDD:395053 94/243 (39%)
Y_phosphatase 428..671 CDD:395053 79/247 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4228
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000829
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.770

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