Sequence 1: | XP_006499054.1 | Gene: | Ptprj / 19271 | MGIID: | 104574 | Length: | 1351 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001260594.1 | Gene: | Lar / 35259 | FlyBaseID: | FBgn0000464 | Length: | 2032 | Species: | Drosophila melanogaster |
Alignment Length: | 1605 | Identity: | 337/1605 - (20%) |
---|---|---|---|
Similarity: | 537/1605 - (33%) | Gaps: | 580/1605 - (36%) |
- Green bases have known domain annotations that are detailed below.
Mouse 160 AVVSPTSVLLTWKHNDSGASECRIENKME--SNLTFPVKNQTSCNITGLSPGTSYTFSIISVTTN 222
Mouse 223 ETLNKTITTEPWPVSDLHVTSVGVTQARLTWSNANGTASYRMLIEELTTHSSVNISGLKPGTNNS 287
Mouse 288 FAFPE--------------SNETQADFAVAEEVPADANGTKRIPVTNLSQLHKNSLVSVDPPSGQ 338
Mouse 339 DPSLTEILLTDLKPDTQYNATIYSQAANGT--EGQPRNKVFKTNSTQVSDVRAMNISASSMTLTW 401
Mouse 402 K--SNYDGSRTSIVYKIHVAGGTHSV-----NQTVNKTE-AIILGLSSSTLYNITVHPFLGQTEG 458
Mouse 459 ---TPGFLQVYTS---PDQVSDFRVTNVSTRAIGLAW-----RSNDSKSFEIFIKQD-GGEKHRN 511
Mouse 512 ASTGNQSYMVEDLKPGTSYHFEIIPRGPDGTEGLSSTVNGSTDP----------SAVTDIRVVNI 566
Mouse 567 STTEMQLEW-----------------------QNTDDASGYTYH---LVLESKSGSIIRTNSSQK 605
Mouse 606 WITVG-SLTPGTLYNVTIFPEVDQIQGISNSITQYTRPSSVSHIEVNTTTTTAAIRWK---NEDA 666
Mouse 667 ASASYAYSVLILKTGDGSNVTSNFTKDP---------SILIPELIPGVSYTVKI--LTQVGDGTT 720
Mouse 721 SL-----VPGWNLFCTEPEPVTSFHCEVVPKEP--ALVLKWACP---FGMYTGFEL--GVRSD-- 771
Mouse 772 -----SWDNMT--RLENCTSDDDTECRTEVAYLNFSTSYNISIATLSC-------GKMALPAQNI 822
Mouse 823 ----------CTTGITDPPTPDGSPNITS----VSHNSV-------------KVKFSGFEASHG- 859
Mouse 860 --PIKAYAVILTTGEAAQPSAD-VLKYTYEDFKRGAS---------------------------- 893
Mouse 894 ------------DTYVTYLIRIEEKGQSQGLSEVLNYEI-------------------------- 920
Mouse 921 -------DVGNQSTTLGY----------YN----------------------------------- 933
Mouse 934 --GRLEPLGSYRACVAGF---------TNITYNLQND-----------GLINGDE---------- 966
Mouse 967 ----------------------------------------------------------------- 966
Mouse 967 -SYVSF-----------------------------SPYSEAVFL------------------PQD 983
Mouse 984 PGV----------ICGAVFGCIFGALAI-TAVGGFIFWRKKRTDAK------------------- 1018
Mouse 1019 ---NNEVSFSQIKPKKSKLIR-----VENFEAYFKKQQADSNCGFAEEYEDLKLIGISLPKYTAE 1075
Mouse 1076 IAENRGKNRYNNVLPYDISRVKL-SVQTHSTDDYINANYMPGYHSKKDFIATQGPLPNTLKDFWR 1139
Mouse 1140 MVWEKNVYAIVMLTKCVEQGRTKCEEYWPSKQAQDYGDITVAMTSEVVLPEWTIRDFVVKNMQNS 1204
Mouse 1205 ESHPLRQFHFTSWPDHGVPDTTDLLINFRYLVRDYMKQIPPES-PILVHCSAGVGRTGTFIAIDR 1268
Mouse 1269 LIYQIENENTVDVYGIVYDLRMHRPLMVQTEDQYVFLNQCVLDII 1313 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ptprj | XP_006499054.1 | fn3 | 162..222 | CDD:365830 | 15/61 (25%) |
fn3 | 383..460 | CDD:365830 | 17/87 (20%) | ||
FN3 | 469..553 | CDD:238020 | 20/89 (22%) | ||
FN3 | 555..622 | CDD:214495 | 16/103 (16%) | ||
FN3 | 642..721 | CDD:238020 | 19/92 (21%) | ||
PTP_tm | 831..1014 | CDD:376280 | 53/477 (11%) | ||
R-PTPc-J | 1083..1311 | CDD:350463 | 104/229 (45%) | ||
Lar | NP_001260594.1 | Ig | 35..129 | CDD:299845 | |
I-set | 36..129 | CDD:254352 | |||
IG_like | 146..227 | CDD:214653 | |||
Ig | 159..228 | CDD:299845 | |||
I-set | 234..318 | CDD:254352 | 17/63 (27%) | ||
Ig3_RPTP_IIa_LAR_like | 249..317 | CDD:143216 | 17/62 (27%) | ||
fn3 | 324..404 | CDD:278470 | 23/114 (20%) | ||
FN3 | 423..514 | CDD:238020 | 23/106 (22%) | ||
FN3 | 520..610 | CDD:238020 | 22/97 (23%) | ||
FN3 | 616..707 | CDD:238020 | 16/94 (17%) | ||
FN3 | 712..810 | CDD:238020 | 21/111 (19%) | ||
FN3 | 832..907 | CDD:238020 | 18/81 (22%) | ||
FN3 | 914..1005 | CDD:238020 | 20/97 (21%) | ||
FN3 | 1012..1101 | CDD:238020 | 5/88 (6%) | ||
fn3 | 1106..1198 | CDD:278470 | 10/91 (11%) | ||
PTPc | 1476..1731 | CDD:214550 | 111/258 (43%) | ||
PTPc | 1503..1731 | CDD:238006 | 105/230 (46%) | ||
PTPc | 1763..2022 | CDD:214550 | |||
PTPc | 1791..2022 | CDD:238006 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3031 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.940 |