DRSC/TRiP Functional Genomics Resources

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Protein Alignment SCAMP5 and Scamp

DIOPT Version :9

Sequence 1:XP_006720483.1 Gene:SCAMP5 / 192683 HGNCID:30386 Length:253 Species:Homo sapiens
Sequence 2:NP_001259572.1 Gene:Scamp / 32470 FlyBaseID:FBgn0040285 Length:343 Species:Drosophila melanogaster


Alignment Length:225 Identity:100/225 - (44%)
Similarity:139/225 - (61%) Gaps:9/225 - (4%)


- Green bases have known domain annotations that are detailed below.


Human    16 GNIMAEKVNNFPPLPKFIPLKPCFYQDFEADIPPQHVSMTKRLYYLWMLNSVTLAVNLVGCLAWL 80
            ||:  .::||:||||....:|||||||||.:|||:...:.|||||:|:..::||..|::|.|..|
  Fly   119 GNV--PQLNNWPPLPDNFCVKPCFYQDFEVEIPPEFQKLVKRLYYIWIFYTMTLLANVIGGLILL 181

Human    81 IGGGGATNFGLAFLWLILFTPCSYVCWFRPIYKAFKTDSSFSFMAFFFTFMAQLVISIIQAVGIP 145
            ...|....|.||..:.:||:|.||||||||.||||:.||||:||.|||.:..|.:.||:||||..
  Fly   182 FHAGEFETFFLAIFYTMLFSPASYVCWFRPAYKAFRNDSSFNFMVFFFIYFFQTLYSIVQAVGFN 246

Human   146 GWGVCGWIATISFF-----GTNIGSAVVMLIPTVMFTVMAVFSFIALSMVHKFYRGSGGSFSKAQ 205
            ..|.||:|..|..|     |..:|  :::|.....||.:||.:.:.::.:|..||.:|.|.:|||
  Fly   247 KMGYCGFITAIGQFDGQASGIIVG--ILLLNVAFCFTAVAVANVLMITKIHSIYRSTGASMAKAQ 309

Human   206 EEWTTGAWKNPHVQQAAQNAAMGAAQGAMN 235
            .|:||...:|.|||:||.:|...|.....|
  Fly   310 AEFTTEFLRNQHVQEAASSAVNTAINSQFN 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCAMP5XP_006720483.1 SCAMP 24..197 CDD:282056 81/177 (46%)
ScampNP_001259572.1 SCAMP 125..301 CDD:282056 81/177 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165141107
Domainoid 1 1.000 185 1.000 Domainoid score I3381
eggNOG 1 0.900 - - E1_KOG3088
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D544579at33208
OrthoFinder 1 1.000 - - FOG0000703
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X309
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
87.710

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