Sequence 1: | XP_006502927.1 | Gene: | Ptprf / 19268 | MGIID: | 102695 | Length: | 1924 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_996413.2 | Gene: | Ptp10D / 32115 | FlyBaseID: | FBgn0004370 | Length: | 1990 | Species: | Drosophila melanogaster |
Alignment Length: | 1697 | Identity: | 400/1697 - (23%) |
---|---|---|---|
Similarity: | 628/1697 - (37%) | Gaps: | 515/1697 - (30%) |
- Green bases have known domain annotations that are detailed below.
Mouse 237 APRFSIPP-----SSQEV---------MPGGSVNLTCVAVGAPMPYVKWMMGAEELTKEDEMP-- 285
Mouse 286 ------VGRNVLELSNVMRSANYTCVAISSLGMIEA-------------TAQVTVKAL------- 324
Mouse 325 -----------------------PKPPIDLVVTETTATSVTLTW-------------------DS 347
Mouse 348 GNT--------EP-----VSFYGI------------------------QYRAAGTDGPFQEV--- 372
Mouse 373 ---DGVASTRYSI-----GGLSPFSEYAFRVLAVNSIGRGPPSEA------------------VR 411
Mouse 412 ARTGEQAPSSPP-------RRVQARML------SASTMLVQWEPPEEPNGLVRGYRVYYTPDSRR 463
Mouse 464 PLSAWHK---HNTDAGLLT------TVGSLLPGITYSLRVLAFTA----------VGDGPPSPTI 509
Mouse 510 Q-VKT-QQGVPAQPADFQANAESDTRIQLSWLLPPQERIVKYELVY---WAAEDEGQQHKVTFDP 569
Mouse 570 TSSYTLEDLKPDTLYHFQLAARS-DLGVGVFTPTVEARTAQSTPSA--------PPQKVTCVSTG 625
Mouse 626 STTVRVSWVPPPADSRNGIITQYSVAYEAVDGEDRKRHVVDGISREHSSWDLLGLEKWT------ 684
Mouse 685 ----EYRVWVRAHTDVGPGPESSPVLVRTDEDV-------------------PSGPPRKVE---- 722
Mouse 723 -----VEPLNSTAV-------HVSWKLPVPNKQHGQIRGYQVTYVRLENGEPRGQPIIQ-DVMLA 774
Mouse 775 EAQWRPEESEDYETTIS---GLTPETTYSITVAAYTTKGDGARSKPKV-------VTTTGAVPGR 829
Mouse 830 PTMMVSTTAMHTALLQWHPPKELPGELLGYRLQYRRADEARPNTIDFGKDDQHFTVTGLHKGATY 894
Mouse 895 VFRLAAKNRAGPGEEFEKEITTPEDVPSGFPQNLRVTGLTTSTTELTWDPPVLAERNGHITNYTV 959
Mouse 960 VYRDINSQLELQNVTNDTHLTLLGLKP--DTTYDIKVRAHTS----KGAGPLSPSIQSRTMPVEQ 1018
Mouse 1019 VFAKNFRVAAAMKTSVLLSWEVPDSYKSAV--PFKILYNG------------QSVEVDGHSMRKL 1069
Mouse 1070 IADLQPNTEYSFVLMNRGSSAGGLQHLVSIRTAPDLLPQKP----LPASAFIEDG----RFSLSM 1126
Mouse 1127 PQVQDPSLVRWFYIVVVPID-RVGGNLLAPRWNTPEELELDELLEAIEQGEEKQRRRRRQAERLK 1190
Mouse 1191 PYVAAQVDVLPDTFTLGDKKSYR---GFYNRPLSPDLSYQCFVLASLKEPMDQKRYASSPYSDEI 1252
Mouse 1253 VVQVTPAQQQEEPEMLWVTGPVLAVILIILIVIAILLFKRKRTH----SPSSKDEQSIGLKDSLL 1313
Mouse 1314 AHSSDPVEMRRLNYQTPGSSAPSCPNISSMRDHPPIPITDLADNIERLKANDGLKFSQEYESI-D 1377
Mouse 1378 PGQQFTWENSNSEVNKPKNRYANVIAYDHSRVLLTSIDGVPGSDYINANYIDGYRKQNAYIATQG 1442
Mouse 1443 PLPETMGDFWRMVWEQRTATVVMMTRLEEKSRVKCDQYWPVRGTET----YGLIQVTLVDTVELA 1503
Mouse 1504 TYTMRTFALHKSGSSEKRELRQFQFMAWPDHGVPEYPTPILAFLRRVKACNPLDAGPMVVHCSAG 1568
Mouse 1569 VGRTGCFIVIDAMLERMKHEKTVDIYGHVTCMRSQRNYMVQTEDQYVFIHEALLEAAMCGHTEVL 1633
Mouse 1634 --ARNLY 1638 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ptprf | XP_006502927.1 | I-set | 33..124 | CDD:369462 | |
Ig2_RPTP_IIa_LAR_like | 152..232 | CDD:319301 | |||
Ig3_RPTP_IIa_LAR_like | 252..320 | CDD:143216 | 17/88 (19%) | ||
FN3 | 325..414 | CDD:238020 | 24/173 (14%) | ||
FN3 | 421..513 | CDD:238020 | 34/124 (27%) | ||
FN3 | 518..607 | CDD:238020 | 15/92 (16%) | ||
FN3 | 615..709 | CDD:238020 | 29/103 (28%) | ||
FN3 | 716..822 | CDD:238020 | 28/132 (21%) | ||
FN3 | 827..916 | CDD:238020 | 14/88 (16%) | ||
FN3 | 925..1013 | CDD:238020 | 23/93 (25%) | ||
FN3 | 1022..>1081 | CDD:238020 | 15/72 (21%) | ||
PTP_DSP_cys | 1352..1627 | CDD:391942 | 119/279 (43%) | ||
R-PTP-F-2 | 1629..1919 | CDD:350477 | 2/12 (17%) | ||
Ptp10D | NP_996413.2 | fn3 | 124..205 | CDD:278470 | 16/80 (20%) |
fn3 | 220..304 | CDD:278470 | 9/83 (11%) | ||
fn3 | 315..391 | CDD:278470 | 11/75 (15%) | ||
FN3 | 405..494 | CDD:238020 | 27/101 (27%) | ||
FN3 | 511..574 | CDD:238020 | 16/81 (20%) | ||
FN3 | 583..671 | CDD:238020 | 25/92 (27%) | ||
fn3 | 683..753 | CDD:278470 | 8/69 (12%) | ||
fn3 | 787..850 | CDD:278470 | 17/76 (22%) | ||
fn3 | 866..935 | CDD:278470 | 22/125 (18%) | ||
fn3 | 961..1043 | CDD:278470 | 18/88 (20%) | ||
PTPc | 1272..1525 | CDD:214550 | 114/257 (44%) | ||
PTPc | 1298..1525 | CDD:238006 | 108/231 (47%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3031 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.940 |