Sequence 1: | XP_036019731.1 | Gene: | Ptprd / 19266 | MGIID: | 97812 | Length: | 1966 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001260594.1 | Gene: | Lar / 35259 | FlyBaseID: | FBgn0000464 | Length: | 2032 | Species: | Drosophila melanogaster |
Alignment Length: | 2129 | Identity: | 996/2129 - (46%) |
---|---|---|---|
Similarity: | 1307/2129 - (61%) | Gaps: | 282/2129 - (13%) |
- Green bases have known domain annotations that are detailed below.
Mouse 12 ARP---LSLLLTFFL------CACAETPPRFTRTPVDQTGVSGGVASFICQATGDPRPKIVWNKK 67
Mouse 68 GKKVSNQRFEVVIEFDDGSGSVLRIQPLRTPRDEAIYECVASNNVGE-ISVSTRLTVLREDQIPR 131
Mouse 132 GFPTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDTSNNNGRIKQLRSESIGGTPI 196
Mouse 197 RGALQIEQSEESDQGKYECVATNSAGTRYSAPANLYVRELREVRRVPPRFSIPP-TNHEIMPGGS 260
Mouse 261 VNITCVAVGSPMPYVKWMLGAEDLTPEDDMPIGRNVLELNDVRQSANYTCVAMSTLGVIEAIAQI 325
Mouse 326 TVKALPKPPGTPVVTESTATSITLTWDSGNPEPVSYYIIQHKPKNSEEPYKEIDGIATTRYSVAG 390
Mouse 391 LSPYSDYEFRVVAVNNIGRGPASEPVLTQTSE-----QAPSSAPRDVQARMLSSTTILVQWKEPE 450
Mouse 451 EPNGQIQGYRVYYTMDPTQHVNNWMKHNVADSQITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDI 515
Mouse 516 QVITQTGVPGQPLNFKAEPESETSILLSWTPP--RSDTIASYELVYRD--GDQGEEQRITIEPGT 576
Mouse 577 SYRLQGLKPNSLYYFRLSARSPQGLGASTAEISARTMQSKPSAPPQDISCTSPSSTSILVSWQPP 641
Mouse 642 PVEKQNGIITEYSLKYAAVDGEDFKPHEILGIPSDTTKYLLEQLEKWTEYRITVTAHTDVGPGPE 706
Mouse 707 SLSVLIRTDEDVPSGPPRKVEVEAVNATAVKVSWRSPVPNKQHGQIRGYQVHYVKMENGEPKG-- 769
Mouse 770 -QPMLKDVMLADAQWEFDDTTEHDMIISGLQPETSYSLTVTAYTTKGDGARSKPKLVSTTGAVPG 833
Mouse 834 KPRL---VINHTQMNTALIQWHPPVDTFGPLQGYRLKFGRKDM----EPLTTLEFSEKEDHFTAT 891
Mouse 892 DIHKGASYVFRLSARNKVGFGEEMVKEISVPEEIPTGFPQNLHSEGTTSTSVQLSWQPPVLAERN 956
Mouse 957 GVITKYTLLYRDINVPLLPMEHLIVPADTSMTL-----TGLKSDTTYDVKVRAHTSKGPGPYSPS 1016
Mouse 1017 VQFRTLPVDQAVFAKNFHVKAVMKTSVLLSWEIPENYNSAMPFKILY--------DDGK-----M 1068
Mouse 1069 VEEVD----------------------GRATQKLIVNLKPE-----------KSYSFVLT----- 1095
Mouse 1096 -------------------NRGNSAGG--------LQHRV------------------------- 1108
Mouse 1109 -----------TAKTAPDVLRTKPAFIGKTNLDGMITVQLPDVPANEN---IKGYYIIIVPLKKS 1159
Mouse 1160 RGKFIKPWESPDEMELDELLKEISRKRRSIRYGREVELKPYIAAHFD--VLPTEFTLGDDKHYGG 1222
Mouse 1223 FTNKQLQSGQEYVFFVLAVMDHAESKMYATSPYSDPVVSMDL------------DPQ-PITDE-- 1272
Mouse 1273 ------EEGLIWVVGPVLAVVFIICIVIAIL-LYKSSKPDRKRAESESRKSSLPNSKEVPSHHPT 1330
Mouse 1331 DPVELRRLNFQTPALSSNSVPYASLIGSVSSLSSQTTTQSIYDNNSLPRFARKGMASHPPIPILE 1395
Mouse 1396 LADHIERLKANDNLKFSQEYESIDPGQQFTWEHSNLEVNKPKNRYANVIAYDHSRVLLSAIEGIP 1460
Mouse 1461 GSDYVNANYIDGYRKQNAYIATQGSLPETFGDFWRMIWEQRSATVVMMTKLEERSRVKCDQYWPS 1525
Mouse 1526 RGTETHGLVQVTLLDTVELATYCVRTFALYKNGSSEKREVRQFQFTAWPDHGVPEHPTPFLAFLR 1590
Mouse 1591 RVKTCNPPDAGPMVVHCSAGVGRTGCFIVIDAMLERIKHEKTVDIYGHVTLMRAQRNYMVQTEDQ 1655
Mouse 1656 YIFIHDALLEAVTCGNTEVPARNLYAYIQKLTQIETGENVTGMELEFKRLASSKAHTSRFISANL 1720
Mouse 1721 PCNKFKNRLVNIMPYESTRVCLQPIRGVEGSDYINASFLDGYRQQKAYIATQGPLAETTEDFWRM 1785
Mouse 1786 LWEHNSTIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQ 1850
Mouse 1851 SRTVRQFQFTDWPEQGVPKSGEGFIDFIGQVHKTKEQFGQDGPISVHCSAGVGRTGVFITLSIVL 1915
Mouse 1916 ERMRYEGVVDIFQTVKMLRTQRPAMVQTEDQYQFCYRAALEYLGSFDHY 1964 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ptprd | XP_036019731.1 | I-set | 31..123 | CDD:400151 | 45/92 (49%) |
Ig strand A' | 39..43 | CDD:409353 | 1/3 (33%) | ||
Ig strand B | 46..55 | CDD:409353 | 6/8 (75%) | ||
Ig strand C | 61..66 | CDD:409353 | 3/4 (75%) | ||
Ig strand C' | 69..72 | CDD:409353 | 2/2 (100%) | ||
Ig strand D | 75..83 | CDD:409353 | 0/7 (0%) | ||
Ig strand E | 84..94 | CDD:409353 | 5/9 (56%) | ||
Ig strand F | 102..110 | CDD:409353 | 6/7 (86%) | ||
Ig strand G | 113..123 | CDD:409353 | 3/10 (30%) | ||
IgI_2_RPTP_IIa_LAR_like | 135..234 | CDD:409400 | 45/98 (46%) | ||
Ig strand B | 151..155 | CDD:409400 | 1/3 (33%) | ||
Ig strand C | 164..168 | CDD:409400 | 1/3 (33%) | ||
Ig strand E | 198..202 | CDD:409400 | 2/3 (67%) | ||
Ig strand F | 212..217 | CDD:409400 | 4/4 (100%) | ||
Ig strand G | 224..227 | CDD:409400 | 0/2 (0%) | ||
IgI_3_RPTP_IIa_LAR_like | 247..328 | CDD:409401 | 48/81 (59%) | ||
Ig strand B | 261..265 | CDD:409401 | 1/3 (33%) | ||
Ig strand C | 274..278 | CDD:409401 | 2/3 (67%) | ||
Ig strand E | 295..299 | CDD:409401 | 3/3 (100%) | ||
Ig strand F | 307..312 | CDD:409401 | 4/4 (100%) | ||
Ig strand G | 320..323 | CDD:409401 | 0/2 (0%) | ||
FN3 | 331..420 | CDD:238020 | 45/88 (51%) | ||
FN3 | 427..519 | CDD:238020 | 44/91 (48%) | ||
FN3 | 524..612 | CDD:238020 | 38/91 (42%) | ||
FN3 | 620..714 | CDD:238020 | 38/93 (41%) | ||
FN3 | 721..827 | CDD:238020 | 41/108 (38%) | ||
FN3 | 832..927 | CDD:238020 | 29/101 (29%) | ||
FN3 | 930..1021 | CDD:238020 | 28/95 (29%) | ||
FN3 | 1031..>1092 | CDD:238020 | 17/106 (16%) | ||
R-PTPc-D-1 | 1388..1671 | CDD:350472 | 207/282 (73%) | ||
R-PTP-D-2 | 1672..1963 | CDD:350476 | 231/290 (80%) | ||
Lar | NP_001260594.1 | Ig | 35..129 | CDD:299845 | 46/93 (49%) |
I-set | 36..129 | CDD:254352 | 45/92 (49%) | ||
IG_like | 146..227 | CDD:214653 | 42/92 (46%) | ||
Ig | 159..228 | CDD:299845 | 39/80 (49%) | ||
I-set | 234..318 | CDD:254352 | 50/83 (60%) | ||
Ig3_RPTP_IIa_LAR_like | 249..317 | CDD:143216 | 42/67 (63%) | ||
fn3 | 324..404 | CDD:278470 | 42/79 (53%) | ||
FN3 | 423..514 | CDD:238020 | 43/90 (48%) | ||
FN3 | 520..610 | CDD:238020 | 38/91 (42%) | ||
FN3 | 616..707 | CDD:238020 | 38/93 (41%) | ||
FN3 | 712..810 | CDD:238020 | 42/110 (38%) | ||
FN3 | 832..907 | CDD:238020 | 25/78 (32%) | ||
FN3 | 914..1005 | CDD:238020 | 29/97 (30%) | ||
FN3 | 1012..1101 | CDD:238020 | 13/88 (15%) | ||
fn3 | 1106..1198 | CDD:278470 | 7/91 (8%) | ||
PTPc | 1476..1731 | CDD:214550 | 186/254 (73%) | ||
PTPc | 1503..1731 | CDD:238006 | 164/227 (72%) | ||
PTPc | 1763..2022 | CDD:214550 | 210/258 (81%) | ||
PTPc | 1791..2022 | CDD:238006 | 193/230 (84%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 422 | 1.000 | Domainoid score | I630 |
eggNOG | 1 | 0.900 | - | - | E2759_KOG4228 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 1260 | 1.000 | Inparanoid score | I173 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG47937 | |
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0001053 | |
OrthoInspector | 1 | 1.000 | - | - | otm43194 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_100623 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR19134 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3031 |
SonicParanoid | 1 | 1.000 | - | - | X953 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
13 | 12.860 |