DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptprc and Ptp10D

DIOPT Version :9

Sequence 1:NP_001104786.2 Gene:Ptprc / 19264 MGIID:97810 Length:1293 Species:Mus musculus
Sequence 2:NP_996413.2 Gene:Ptp10D / 32115 FlyBaseID:FBgn0004370 Length:1990 Species:Drosophila melanogaster


Alignment Length:1475 Identity:324/1475 - (21%)
Similarity:527/1475 - (35%) Gaps:383/1475 - (25%)


- Green bases have known domain annotations that are detailed below.


Mouse     4 GLWLKLLAFGFAL-LDTEVFVTGQTPTPSDEL---STTENALLLPQSDPLPARTTESTPPSISER 64
            |..||:.|....| .:...:.....|.|...:   :...|::|:..|   |..:.|.|..||..|
  Fly   558 GYELKVFAVSHDLRSEPHAYFQAVYPNPPRNMTIETVRSNSVLVHWS---PPESGEFTEYSIRYR 619

Mouse    65 GNGSSETTYHPGVLSTLLPHLSPQPDSQTPSAG-----GADTQTFS-----SQADNPTLTPAPGG 119
            .:...:....|.|.||       :.|....:.|     ..:|.:|.     .|..|.|:.|.|..
  Fly   620 TDSEQQWVRLPSVRST-------EADITDMTKGEKYTIQVNTVSFGVESPVPQEVNTTVPPNPVS 677

Mouse   120 G----TDPPGVPGERTVP-GTI--------PADTAFPVDTPSLARNSSA--------------AS 157
            .    .|...:..|...| |.:        |:|....|.|.:::.|.||              ..
  Fly   678 NIIQLVDSRNITLEWPKPEGRVESYILKWWPSDNPGRVQTKNVSENKSADDLSTVRVLIGELMPG 742

Mouse   158 PTHTSNVSTTDISSGASLTTLTPSTLGLASTDPPSTTIATTTKQTCAAMFGNITVNYT-YESSNQ 221
            ..:..::.||.....:.:|:|.|.|:.|..:|   ..:|...|:.   ....||::|| ...|:.
  Fly   743 VQYKFDIQTTSYGILSGITSLYPRTMPLIQSD---VVVANGEKED---ERDTITLSYTPTPQSSS 801

Mouse   222 TFKADLKDVQNAKCGN---EDCENVLNNLEE--------CSQIKNISV----SNDSCAPATTID- 270
            .|     |:.....|:   .|.|.:.|:.:.        ..::.||:|    ...:..|....| 
  Fly   802 KF-----DIYRFSLGDAEIRDKEKLANDTDRKVTFTGLVPGRLYNITVWTVSGGVASLPIQRQDR 861

Mouse   271 LYVPPGTDKFSLHDCTPKEKANTSICLEW-----KTKNLDFRKCNSDNISYVLHCEPENNTKCIR 330
            ||..|.|   .||   .....:|.|.|.|     :..:.|.....:||:              :.
  Fly   862 LYPEPIT---QLH---ATNITDTEISLRWDLPKGEYNDFDIAYLTADNL--------------LA 906

Mouse   331 RNTFIPERCQLDNLRAQTNYTCV--------AEILYRGVKLVKNVINVQTDLGIPETPKPSCGDP 387
            :|........:.:||...|||..        :.:|.....|..:....:...|..|...|:...|
  Fly   907 QNMTTRNEITISDLRPHRNYTFTVVVRSGTESSVLRSSSPLSASFTTNEAVPGRVERFHPTDVQP 971

Mouse   388 AARKTLVSWPEPVSKPESASKPHGYVLCYKNNSEKCKSLPNNVT-----SFE-------VESLKP 440
            :  :....|..|.|:.....:.  :.:.|.|        .||:|     .||       :::|||
  Fly   972 S--EINFEWSLPSSEANGVIRQ--FSIAYTN--------INNLTDAGMQDFESEEAFGVIKNLKP 1024

Mouse   441 YKYYEVSLLAYV----------------------------------NGKIQ----------RNGT 461
            .:.|...:.|..                                  :..||          :||.
  Fly  1025 GETYVFKIQAKTAIGFGPEREYRQTMPILAPPRPATQVVPTEVYRSSSTIQIRFRKNYFSDQNGQ 1089

Mouse   462 AEKCNFHTKADRPDKVNGMKTSRPTD-NSINVTCGPPYETNGPKTFYILVVRSGGSFVTKYNKTN 525
            ..........|.....:|::.....| .|.:|..  ||:...|  :|....||...|.  ....|
  Fly  1090 VRMYTIIVAEDDAKNASGLEMPSWLDVQSYSVWL--PYQAIDP--YYPFENRSVEDFT--IGTEN 1148

Mouse   526 CQFYVDN---------LYYSTDYEFLVSFHNGVYEGDSVIRNESTNF-------NAKALIIFLVF 574
            |    ||         |...|.|...|.    .:.|.....:.:.:|       |...::...|.
  Fly  1149 C----DNHKIGYCNGPLKSGTTYRVKVR----AFTGADKFTDTAYSFPIQTDQDNTSLIVAITVP 1205

Mouse   575 LIIVTSIALLVVLYKIYDLRKKRSSNLDEQQELVERDDEKQLMD--VE---PIHSDILLETYKRK 634
            |.|:..:.:.::.|      |:|.:|..:..:....:|...|.|  :|   ||......|.|:..
  Fly  1206 LTIILVLLVTLLFY------KRRRNNCRKTTKDSRANDNMSLPDSVIEQNRPILIKNFAEHYRLM 1264

Mouse   635 IADEGRLFLAEFQSIPRVFSKFPIKDARKPHNQNKNRYVDILPYDYNRVELSEINGDAGSTYINA 699
            .||....|..||:.:..|....|...|..|.|:.|||:.:|||||::|.:|..::.|.||.||||
  Fly  1265 SADSDFRFSEEFEELKHVGRDQPCTFADLPCNRPKNRFTNILPYDHSRFKLQPVDDDEGSDYINA 1329

Mouse   700 SYIDGFKEPRKYIAAQGPRDETVDDFWRMIWEQKATVIVMVTRCEEGNRNKCAEYWPSMEEGTRA 764
            :|:.|...||::|..|||...|.||||||.||..:..|||:|||.|..|.||.:|||: :.....
  Fly  1330 NYVPGHNSPREFIVTQGPLHSTRDDFWRMCWESNSRAIVMLTRCFEKGREKCDQYWPN-DTVPVF 1393

Mouse   765 FKDIVVTINDHKRCPDYIIQKLNVAHKKEKATGREVTHIQFTSWPDHGVPEDPHLLLKLRRRVNA 829
            :.||.|.|.:.....|:::.:..:....|:   |.:.|..||:|||.|||..|..|:   |.|.|
  Fly  1394 YGDIKVQILNDSHYADWVMTEFMLCRGSEQ---RILRHFHFTTWPDFGVPNPPQTLV---RFVRA 1452

Mouse   830 FSNFFSG---PIVVHCSAGVGRTGTYIGIDAMLEGLEAEGKVDVYGYVVKLRRQRCLMVQVEAQY 891
            |.:....   ||||||||||||:||:|.:|.:|:.:.....||::|.|..:|::|..|||.|.||
  Fly  1453 FRDRIGAEQRPIVVHCSAGVGRSGTFITLDRILQQINTSDYVDIFGIVYAMRKERVWMVQTEQQY 1517

Mouse   892 ILIHQAL---------------------------VEYNQFGETEVNLSELHSCLHNMKKRDPPS- 928
            |.|||.|                           |:.::.|:....: |.|...|::::.:..: 
  Fly  1518 ICIHQCLLAVLEGKENIVGPAREMHDNEGYEGQQVQLDENGDVVATI-EGHLSHHDLQQAEAEAI 1581

Mouse   929 ----------DPSPLEAEY----QRLPSYRSW-----------------RTQHIGNQEENKKK-- 960
                      |..||.:.:    ..:|...|.                 |...:.||.:|...  
  Fly  1582 DDENAAILHDDQQPLTSSFTGHHTHMPPTTSMSSFGGGGGGHTNVDAPDRXHSVVNQSDNNNSVV 1646

Mouse   961 -----NRNSNVVPYDFNRVPLKHELEMSKESEPESDESSDDDSDSEETSKYINASFVMSYWKPEM 1020
                 |:.|:::..|.....: ..||..::.:.:..:..:....:..|...||....:.:.:...
  Fly  1647 IVLVDNKPSSMICKDSKGGNI-DVLESQQQQQQQQQQQPNQGGHNITTISAINGYNTLQHRRKSQ 1710

Mouse  1021 MI---AAQGPLKETIGDFWQMIFQRKVKVIVMLTELVNGDQEVCAQYWGEGKQTYGDMEVEMKDT 1082
            :|   ::...:|.::..                 |.:||.....|    .|..:.|........:
  Fly  1711 LITFSSSSCDIKNSLSH-----------------EYINGSNGSAA----NGPPSSGSGSGSGPGS 1754

Mouse  1083 NRASAYTLR---------TFELRHSKRK---------EPRTVYQYQCTTWKGEELPAEPKDLVSM 1129
            ||||...:|         .....||::.         ..|::.:.:.....||:....|.:   |
  Fly  1755 NRASRANVRLSFAEEDVMILPQNHSQQSNHQDDEVFTRRRSLLEVEIGVEVGEDGELAPHE---M 1816

Mouse  1130 IQDLKQKLPKASPEGMKYHKHASILVH----CRDGSQQTG---------LFCAL----FNLLESA 1177
            .:||:::     .|..:.:.|.....|    ..:.:..:|         |..:|    .|.||..
  Fly  1817 EEDLEEE-----DEDEELYMHDEFETHIDTKSNNANDDSGGGSYEDSHALHSSLGGSNRNSLEKD 1876

Mouse  1178 ETEDVVDVFQVVKSLRKARPGVVCSYEQYQFLYDIIASIYPAQNG 1222
            :.:..|||...         .|.| |:|      ::.|....:||
  Fly  1877 DDDIEVDVIST---------DVSC-YDQ------LLGSSCNTRNG 1905

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PtprcNP_001104786.2 PTP_N 7..31 CDD:372119 5/24 (21%)
Herpes_BLLF1 <27..>191 CDD:282904 43/203 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 43..174 33/167 (20%)
CD45 212..265 CDD:372194 12/68 (18%)
FN3 393..451 CDD:238020 14/69 (20%)
FN3 474..553 CDD:238020 19/88 (22%)
R-PTPc-C-1 696..896 CDD:350405 87/202 (43%)
Substrate binding. /evidence=ECO:0000250 842..848 5/5 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 980..1003 2/22 (9%)
R-PTP-C-2 1006..1211 CDD:350406 40/242 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1240..1293
Ptp10DNP_996413.2 fn3 124..205 CDD:278470
fn3 220..304 CDD:278470
fn3 315..391 CDD:278470
FN3 405..494 CDD:238020
FN3 511..574 CDD:238020 5/15 (33%)
FN3 583..671 CDD:238020 21/97 (22%)
fn3 683..753 CDD:278470 12/69 (17%)
fn3 787..850 CDD:278470 14/67 (21%)
fn3 866..935 CDD:278470 17/88 (19%)
fn3 961..1043 CDD:278470 18/93 (19%)
PTPc 1272..1525 CDD:214550 110/259 (42%)
PTPc 1298..1525 CDD:238006 102/233 (44%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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