Sequence 1: | XP_036015592.1 | Gene: | Ptpra / 19262 | MGIID: | 97808 | Length: | 838 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001260594.1 | Gene: | Lar / 35259 | FlyBaseID: | FBgn0000464 | Length: | 2032 | Species: | Drosophila melanogaster |
Alignment Length: | 694 | Identity: | 308/694 - (44%) |
---|---|---|---|
Similarity: | 427/694 - (61%) | Gaps: | 49/694 - (7%) |
- Green bases have known domain annotations that are detailed below.
Mouse 167 WAHSPNVISNSDSKDRRDETPIIAVMVAL--SSLLVIVFIIIVLYMLRFKKYKQAGSHSNSFRLS 229
Mouse 230 NGRTEDVEPQSVPLLA---------RSPSTNRK----------YPPLPVDKLEEEINRRMADDNK 275
Mouse 276 LFREEFNALPACPIQATCEAASKEENKEKNRYVNILPYDHSRVHLTPVEGVPDSDYINASFINGY 340
Mouse 341 QEKNKFIAAQGPKEETVNDFWRMIWEQNTATIVMVTNLKERKECKCAQYWPDQGCWTYGNVRVSV 405
Mouse 406 EDVTVLVDYTVRKF--CIQQVGDVTNRKPQRLITQFHFTSWPDFGVPFTPIGMLKFLKKVKACNP 468
Mouse 469 QYAGAIVVHCSAGVGRTGTFVVIDAMLDMMHSERKVDVYGFVSRIRAQRCQMVQTDMQYVFIYQA 533
Mouse 534 LLEHYLYGDTELEVTSLETHLQKIYNKIPGTSNNGLEEEFKKLTSIKIQNDKMRTGNLPANMKKN 598
Mouse 599 RVLQIIPYEFNRVIIPVKRGEENTDYVNASFIDGYRQKDSYIASQGPLLHTIEDFWRMIWEWKSC 663
Mouse 664 SIVMLTELEERGQEKCAQYWPSDGLVSYGDITVELKKEEECESYTVRDLLVTNTRENKSRQIRQF 728
Mouse 729 HFHGWPEVGIPSDGKGMINIIAAVQKQQQQSG-NHPITVHCSAGAGRTGTFCALSTVLERVKAEG 792
Mouse 793 ILDVFQTVKSLRLQRPHMVQTLEQYEFCYKVVQEYIDAFSDYAN 836 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ptpra | XP_036015592.1 | R-PTPc-A-1 | 250..545 | CDD:350469 | 138/306 (45%) |
R-PTPc-A-2 | 599..826 | CDD:350471 | 120/227 (53%) | ||
Lar | NP_001260594.1 | Ig | 35..129 | CDD:299845 | |
I-set | 36..129 | CDD:254352 | |||
IG_like | 146..227 | CDD:214653 | |||
Ig | 159..228 | CDD:299845 | |||
I-set | 234..318 | CDD:254352 | |||
Ig3_RPTP_IIa_LAR_like | 249..317 | CDD:143216 | |||
fn3 | 324..404 | CDD:278470 | |||
FN3 | 423..514 | CDD:238020 | |||
FN3 | 520..610 | CDD:238020 | |||
FN3 | 616..707 | CDD:238020 | |||
FN3 | 712..810 | CDD:238020 | |||
FN3 | 832..907 | CDD:238020 | |||
FN3 | 914..1005 | CDD:238020 | |||
FN3 | 1012..1101 | CDD:238020 | |||
fn3 | 1106..1198 | CDD:278470 | |||
PTPc | 1476..1731 | CDD:214550 | 126/261 (48%) | ||
PTPc | 1503..1731 | CDD:238006 | 119/233 (51%) | ||
PTPc | 1763..2022 | CDD:214550 | 136/258 (53%) | ||
PTPc | 1791..2022 | CDD:238006 | 122/230 (53%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG4228 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100623 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.710 |