DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptpn20 and PTP-ER

DIOPT Version :9

Sequence 1:XP_006518791.1 Gene:Ptpn20 / 19256 MGIID:1196295 Length:463 Species:Mus musculus
Sequence 2:NP_726092.1 Gene:PTP-ER / 37461 FlyBaseID:FBgn0016641 Length:1377 Species:Drosophila melanogaster


Alignment Length:581 Identity:125/581 - (21%)
Similarity:191/581 - (32%) Gaps:270/581 - (46%)


- Green bases have known domain annotations that are detailed below.


Mouse   122 VSDRSLRNRWNSMDSETAGPSKTVSPVLSGSSRLSKDTET-------SVSEKELTQLAQIRPLIF 179
            |.|.|.:...|.::.         .|||..::|   |.||       |..:.||  ||..:.:: 
  Fly   824 VFDHSYQTNRNIIEQ---------PPVLGSNAR---DVETPTDMVPPSSEDSEL--LASYQTVV- 873

Mouse   180 NSSARSAMRDCLNTLQKKEELDIIREF------LELEQMTLPDDFNSGNTLQNRDKNRYRDILPY 238
                 |.|...:..|::.|:..|.|:.      |.|.....|..|.|      :.||||:.|||.
  Fly   874 -----SRMAQPIPELKENEQKRIFRDLHKEFWDLPLNHQEKPMVFGS------QTKNRYKTILPN 927

Mouse   239 DSTRVPL----------------------GKNKDYINASYIRIVNHEEEYFYIATQGPLPETIED 281
            :::||.|                      .::..||||:||:..::..: .|:|||||||.||.:
  Fly   928 ENSRVLLESESSELTSLLGEIKRTSSVTASEDLPYINANYIKGPDYVSK-CYVATQGPLPNTIFE 991

Mouse   282 FWQMVLEN------NC---------------------NVIAMITREIECGVIKCYSYWPISLKE- 318
            ||.|:.:|      .|                     ..|.|:|...|....||..|:||.|.| 
  Fly   992 FWLMIYQNTQRYIRRCVDGGSSSSPHVDREQILQQYFQKIVMLTNFTEANRQKCAVYFPIELNEI 1056

Mouse   319 --------------------------------------PLEFE----HFSVFLETFHVT------ 335
                                                  .:::|    |..|  |:..||      
  Fly  1057 FAVAAKCEVFQLSAAARDYFDRYLTPTFVPDTVVASSDAIDYEISGRHIGV--ESVKVTLEGDLL 1119

Mouse   336 -------QYFTVRVFQIVKKSTGKS-------QCVK-------HLQ--------FTKWPDHGTPA 371
                   .:|.::...||::: |.|       .|::       |||        :..||||.:|.
  Fly  1120 EALPAQGSFFLIKNVGIVRRN-GYSVRKLVLLYCIRVPQSASYHLQKIYCYHYWYPDWPDHHSPR 1183

Mouse   372 SADFFIKYVRYV-------------------RKSHITG---------------PL-LVHCSAGVG 401
            ..:..:....:|                   |.:|:..               || ::|||||:|
  Fly  1184 DINTLLDTCLHVLNLGKCESEFDIYDDTRSERNAHLAAQRLEIYQQDIFNAVQPLPVIHCSAGIG 1248

Mouse   402 RTGVFICV-------------------------------------DVVFS--------------- 414
            |||.|..:                                     |..|:               
  Fly  1249 RTGCFTAILNAVRQLRQSLAYSLTGMLTKSLTSSSTEEYHNPTDSDSSFTCNTIRHISHILDHRD 1313

Mouse   415 --AIEKNYSF-----------DIMNIVTQMRKQRCGMIQTKEQYQFCYEIVLEVLQNLLAL 462
              |::...||           |::.||..:|.||.||:|..|||:..:..:...|:..|||
  Fly  1314 AEAVKTPPSFDRLPKMPDIFVDVLGIVCNLRLQRGGMVQNSEQYELIHRAICLYLKRTLAL 1374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptpn20XP_006518791.1 PTP_DSP_cys 251..457 CDD:391942 84/410 (20%)
PTP-ERNP_726092.1 Y_phosphatase 916..1364 CDD:278528 94/451 (21%)
PTPc 917..1364 CDD:238006 94/450 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0789
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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