DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptpn18 and PTP-ER

DIOPT Version :9

Sequence 1:NP_035336.2 Gene:Ptpn18 / 19253 MGIID:108410 Length:453 Species:Mus musculus
Sequence 2:NP_726092.1 Gene:PTP-ER / 37461 FlyBaseID:FBgn0016641 Length:1377 Species:Drosophila melanogaster


Alignment Length:515 Identity:101/515 - (19%)
Similarity:166/515 - (32%) Gaps:234/515 - (45%)


- Green bases have known domain annotations that are detailed below.


Mouse     1 MSRHTDLVRSFLEQLEARDYREGAILAREFSDIKARSVAWKSEGVCSTKAGSRLGNTNKNRYKDV 65
            :||....:....|..:.|.:|:   |.:||.|:...          ..:.....|:..|||||.:
  Fly   873 VSRMAQPIPELKENEQKRIFRD---LHKEFWDLPLN----------HQEKPMVFGSQTKNRYKTI 924

Mouse    66 VAYDETRVIL--------SLLQEEGHGD---------YINANFIRGID-GSQAYIATQGPLPHTL 112
            :..:.:||:|        |||.|.....         |||||:|:|.| .|:.|:|||||||:|:
  Fly   925 LPNENSRVLLESESSELTSLLGEIKRTSSVTASEDLPYINANYIKGPDYVSKCYVATQGPLPNTI 989

Mouse   113 LDFWRLVW----------------------------EFGVKVILMACQETENGRRKCERYWAREQ 149
            .:||.:::                            ::..|::::. ..||..|:||..|:..|.
  Fly   990 FEFWLMIYQNTQRYIRRCVDGGSSSSPHVDREQILQQYFQKIVMLT-NFTEANRQKCAVYFPIEL 1053

Mouse   150 EPL-----KAGPFCI--------------TLTKETTLNAD-----------ITLRTLQVTFQKEF 184
            ..:     |...|.:              |...:|.:.:.           |.:.:::||.:.:.
  Fly  1054 NEIFAVAAKCEVFQLSAAARDYFDRYLTPTFVPDTVVASSDAIDYEISGRHIGVESVKVTLEGDL 1118

Mouse   185 -----------------------RSVHQL------------------------QYMSWPDHGVPS 202
                                   .||.:|                        .|..||||..|.
  Fly  1119 LEALPAQGSFFLIKNVGIVRRNGYSVRKLVLLYCIRVPQSASYHLQKIYCYHYWYPDWPDHHSPR 1183

Mouse   203 SSD-------HILTM---------------------------VEEARCLQGLGPGPLCVHCSAGC 233
            ..:       |:|.:                           :.:......:.|.|: :|||||.
  Fly  1184 DINTLLDTCLHVLNLGKCESEFDIYDDTRSERNAHLAAQRLEIYQQDIFNAVQPLPV-IHCSAGI 1247

Mouse   234 GRTGVLCAV-DYVRQL----------LLTQTI--------------------------------- 254
            ||||...|: :.||||          :||:::                                 
  Fly  1248 GRTGCFTAILNAVRQLRQSLAYSLTGMLTKSLTSSSTEEYHNPTDSDSSFTCNTIRHISHILDHR 1312

Mouse   255 -------PPNF-----------SLFQVVLEMRKQRPAAVQTEEQYRFLYHTVAQLFSRTL 296
                   ||:|           .:..:|..:|.||...||..|||..::..:.....|||
  Fly  1313 DAEAVKTPPSFDRLPKMPDIFVDVLGIVCNLRLQRGGMVQNSEQYELIHRAICLYLKRTL 1372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptpn18NP_035336.2 Y_phosphatase 56..290 CDD:278528 88/452 (19%)
PTPc 59..290 CDD:238006 88/449 (20%)
Substrate binding. /evidence=ECO:0000250 229..235 4/5 (80%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 384..453
PTP-ERNP_726092.1 Y_phosphatase 916..1364 CDD:278528 88/449 (20%)
PTPc 917..1364 CDD:238006 88/448 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0789
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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