DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12084 and Zyg11a

DIOPT Version :9

Sequence 1:NP_612112.1 Gene:CG12084 / 192509 FlyBaseID:FBgn0043458 Length:793 Species:Drosophila melanogaster
Sequence 2:XP_233348.6 Gene:Zyg11a / 313482 RGDID:1309582 Length:760 Species:Rattus norvegicus


Alignment Length:833 Identity:219/833 - (26%)
Similarity:344/833 - (41%) Gaps:187/833 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 DEEPLTLKEIAYQKLCNNLDIISSHRPDGQRGLNPGIVLPNEICDGFLENYQRFNRPLDDSVIRL 78
            :..|..|..|....|...||...|.||||...|......|:||.|.|||. ..:...|.|....:
  Rat    32 EASPYPLVNICMDVLIAKLDKWCSKRPDGTLCLPEHWYFPHEIADKFLER-MAWQGKLTDRTASI 95

  Fly    79 FEDTHRTSLKIVNLRNSTLSSIGL-ETLMRHKLFALSLWYCDMISVGSHHLLAHYGDSLRSLELG 142
            |:. .:.|||::|:|...||:... :....|||..:     |..||.| .|||  .|.:.:|:  
  Rat    96 FQG-KQVSLKLMNIRRVKLSAAAFTQAFCHHKLTEV-----DATSVDS-QLLA--PDIVHALQ-- 149

  Fly   143 ISSHLLQYAEPNEKEPVDFQLTCPHLRRLVLNGVVMHHRL------QFAHLHDLGHLDLTSCVLA 201
             .|..:|                .:|:.|||:.|.:....      ||..||.   |.|.:....
  Rat   150 -GSAWIQ----------------KNLQCLVLDSVSVPQNSGLLALGQFTGLHT---LSLANVSFR 194

  Fly   202 NFSLEALGSLPNLHTLILFN--VWPIA------NQL-----HAICCL-----------RRL-CTL 241
            |..|..:..||:|.:|.:.|  |..|:      |:|     |.:.||           |:| |.|
  Rat   195 NEDLVGVSQLPSLESLDISNTLVTDISALLSCKNRLRSLTMHYLKCLAMNNPQILDVIRQLKCLL 259

  Fly   242 DISISSSGNGHGTY--DLPDQTLEMLMDNLRHLTHLDISGTNLAGNGVATKESTTTSGMQQSPKM 304
            .:.||.    |...  ||....|:. .|.|.:|..|||||      |....:....|.:|..|.|
  Rat   260 HLDISD----HRQLKSDLAFYLLQQ-KDILPNLISLDISG------GTDITDQVVESFLQHRPAM 313

  Fly   305 EQHFALTDIPGLASRTQRPLQFLGLYHT----AHWACKRHDIPALEVAGDANEQQILTAARYYHD 365
                                :|:||.:|    :.:...|.|   |:|||.||..||..|...|..
  Rat   314 --------------------RFVGLLYTDAGYSDFFMGRQD---LKVAGGANMSQISEALSRYRH 355

  Fly   366 RPVLLTRVLNDLYHLFRFENCKDIHTALDVVLS----AMDRHLKFKHMQISGSATLFYIVKGRDR 426
            |...   |...||.|  |.....:...|.|||.    .|..|.....:|.:.||.          
  Rat   356 RSCF---VKEALYRL--FTETLSLRVILPVVLKLVAIGMRNHPLDLPVQFTASAC---------- 405

  Fly   427 SKFGALLRNHIIRTLLNGMEMHITDD----------------TMLRNGYLTLTQFHMPVDVLFEY 475
                ||...|  :.|..||.:.:..:                .:.:|..|:||...:.:||.|:.
  Rat   406 ----ALNLTH--QGLARGMPVRLLSEITYLLFKATKNFPYYQQLQKNCLLSLTSSRILMDVPFDR 464

  Fly   476 ERLIKILLHGVSKTEQEGFVQRIAIYLLNTLACQVDGRQ-KLFLGELGV-VSTMFTLIKDRLTRS 538
            ....:::|..|.|.|... :|.:|:.:.:.||.::...: :.|..||.: |..:.|:|:.::..:
  Rat   465 FDAARLVLRWVCKRESPK-MQMMAVSITSILALKLSPEEIEQFQEELALAVKELLTIIRQKMAEN 528

  Fly   539 VFDDVMEVAWSTMWNVTDETAINCKRFLDGRGMEYFLKCLHTFPDRDELLRNMMGLLGNVAEVKW 603
            :.|..:......:||:|||..:.||.|::..|:...::.|.|| ....:...::|||.|:|||:.
  Rat   529 LNDVTLLFTLKALWNLTDECPLACKYFIENEGLATIVQVLETF-SVSAIQSKVLGLLNNMAEVRE 592

  Fly   604 LRPKLMTQEFIEVFARLLDSLSDGIEVGGASASVVARVREREMASANHAYLRFQVSYNAAGVLAH 668
            |.|.|:|::.:|....||.| ||                             .:||:.||||:||
  Rat   593 LSPALVTEDLMEHTVSLLHS-SD-----------------------------IEVSFLAAGVIAH 627

  Fly   669 IASDGADAWTIKTPSREHVLERMVAAIQRWNIKSER-----NINYRSFEPILSLVRCYETPQCQH 728
            :..| ...|...:|.|..:|:.:...||.|  .|.|     .:.||||:....|:..:..|:.|.
  Rat   628 LTCD-RQQWLSHSPRRRALLQDLHLTIQNW--PSSRCDMSALVTYRSFKAFPPLLVNFSQPEVQR 689

  Fly   729 WAVWALANLTQVYPEKYCKLVEQENGIQILNELIEHESPYCEIKRIARLVIEQ 781
            ||:||:.::....|.|||||:.:|.|:|::.::.||:....:::::...::::
  Rat   690 WALWAIHHVCNKNPSKYCKLLLEEGGLQLMYDIQEHDQASAQVRQMVSSILKE 742

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12084NP_612112.1 leucine-rich repeat 110..135 CDD:275381 8/24 (33%)
leucine-rich repeat 136..167 CDD:275381 3/30 (10%)
leucine-rich repeat 168..189 CDD:275381 8/26 (31%)
leucine-rich repeat 190..213 CDD:275381 5/22 (23%)
ARM 535..628 CDD:237987 30/92 (33%)
Zyg11aXP_233348.6 LRR <156..>294 CDD:227223 41/145 (28%)
leucine-rich repeat 158..182 CDD:275381 7/23 (30%)
LRR_4 181..223 CDD:289563 13/44 (30%)
leucine-rich repeat 183..206 CDD:275381 7/25 (28%)
leucine-rich repeat 207..229 CDD:275381 5/21 (24%)
leucine-rich repeat 258..286 CDD:275381 9/32 (28%)
leucine-rich repeat 287..309 CDD:275381 8/27 (30%)
ARM 524..629 CDD:237987 38/135 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3665
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D120457at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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