DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12084 and H24K24.2

DIOPT Version :9

Sequence 1:NP_612112.1 Gene:CG12084 / 192509 FlyBaseID:FBgn0043458 Length:793 Species:Drosophila melanogaster
Sequence 2:NP_001300124.1 Gene:H24K24.2 / 186774 WormBaseID:WBGene00019239 Length:473 Species:Caenorhabditis elegans


Alignment Length:471 Identity:99/471 - (21%)
Similarity:171/471 - (36%) Gaps:145/471 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 ENYQRFNRPLDDSVI-RLFEDT----------------HRTSLKIVNLRNSTLSSIGLETLMRHK 109
            :|:....||||.:.. ::|.:.                |...||.|:|.|..:|...:|.:....
 Worm    20 DNFNMLVRPLDRTASDKMFSELMKLKFGLCEEALTRFGHFFCLKKVDLFNYHVSKELVEAIRCQN 84

  Fly   110 LFALSLWYCDMISVGSHHLLAHYGDSLRSLELGISS------HLLQYA--EPNEKE-PVDFQLTC 165
            |.:|||...|.:..|...:..:  |.:|.||..::.      |.|:..  .|..|| |.......
 Worm    85 LESLSLGNLDWVKRGRRFMNGY--DIVRFLESFLNEESRNVLHSLEITMESPFAKEWPAKINNML 147

  Fly   166 PHLRRLVLNGVVMHHRLQFAHL----HDLGHLDLTSCVLANFSLEALGSLPNLHTLILFNVWPIA 226
            |.|:...:||.|...  :|:||    .:|..||:::..:.|  |..:..|.||..|.:.|:  ..
 Worm   148 PALKCFAINGQVNDD--EFSHLCIGFSNLRVLDISNTNIRN--LSGMKMLVNLQILSMRNL--DI 206

  Fly   227 NQ---LHAICCLRRLCTLDISISSSGNGHGTYDLPDQTLEMLMDNLRHLTHLDISGTNLAGNGVA 288
            ||   |..:..|.:|..||:|.....:|........:..::|:|    |..:|.|.|::      
 Worm   207 NQTSDLIELFSLTKLTVLDVSQDKQNSGTKIISTYLECRKILLD----LKFIDCSRTDI------ 261

  Fly   289 TKESTTTSGMQQSPKMEQHFALTDIPGLASRTQRPLQFLGLYHTAHWACKRHDIPALEVAGDANE 353
                            .:.||.|.:....|          :.|.:...|   |:......|    
 Worm   262 ----------------NREFAKTLLSSHPS----------IVHVSAIGC---DLKNFSKCG---- 293

  Fly   354 QQILTAARYYHDRPVLLTRVL--NDLYHLFR----FENCK-DIHTALDVVLSAMDRHLKFKHMQI 411
                             ||:.  ..:..|||    |.|.| ::.|.         |.|:..|.|:
 Worm   294 -----------------TRIFYCTSIESLFRSLIDFTNLKNELATC---------RCLEELHRQL 332

  Fly   412 SGSATLFYIVKGRDRSKFGALLRNHIIR---------TLLNGME--MHITDDTMLRNGYLTLTQF 465
            :.|       :..:...:.:||: .:|:         ||:||::  :.|.:..|.:.|       
 Worm   333 NAS-------RSTENLHYSSLLK-LVIQTMNMFTSRSTLINGLQCLIWIINHKMDQIG------- 382

  Fly   466 HMPVDVLFEYERLIKI 481
              ||::.|..::|:.:
 Worm   383 --PVNMFFTLKKLLSL 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12084NP_612112.1 leucine-rich repeat 110..135 CDD:275381 6/24 (25%)
leucine-rich repeat 136..167 CDD:275381 9/39 (23%)
leucine-rich repeat 168..189 CDD:275381 7/24 (29%)
leucine-rich repeat 190..213 CDD:275381 6/22 (27%)
ARM 535..628 CDD:237987
H24K24.2NP_001300124.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3665
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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