DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5180 and CG6175

DIOPT Version :9

Sequence 1:NP_001138087.1 Gene:CG5180 / 192508 FlyBaseID:FBgn0043457 Length:355 Species:Drosophila melanogaster
Sequence 2:NP_001261708.1 Gene:CG6175 / 39271 FlyBaseID:FBgn0036152 Length:569 Species:Drosophila melanogaster


Alignment Length:507 Identity:110/507 - (21%)
Similarity:168/507 - (33%) Gaps:173/507 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DLRSYSRHWLTEFIEQYQEEECLWQPKHNDYSNHTARNKSYDRLVEKLKEVEPNPDRAMVVRKIN 68
            |...:||..:..|||.|:.:..||.|....|  |..:.| |:.|  ||...:...:...:..||.
  Fly    52 DRVEWSRSTILNFIEDYRRQRVLWDPNTKGY--HIKQTK-YEAL--KLLSQKYGTEIRSIRSKIK 111

  Fly    69 SLRSAFRREFRKT---STKGDYATRLWY-YDKLLFIAD-----------HKPKRHELGSKPKREL 118
            ||||:|.||..|.   ..:|.....:|: |:.:.||.|           .:....|.....|..|
  Fly   112 SLRSSFHREHGKVLSGRNRGVIYQPMWFAYEAIRFILDGERDQDRDQDQDQDAETETEVDEKLAL 176

  Fly   119 HISFDDEE-------------SMEFEDDSHH-----------------TGTQSQHMESIIPTSPD 153
            ..|.|.|:             .:|.:...|.                 ....::..|..:.|:.|
  Fly   177 MHSLDLEQLKADKLVDRDIILQVEQQQQQHDELTARIAATVAAVAAAAAAANARDRERDVDTAGD 241

  Fly   154 -------DVEEVAATANNVVVSSQGA------------TLSTISVTPAECVTL----VKSE--EH 193
                   ::|| ||....::.||..|            |.|:..:.......:    ||:|  ||
  Fly   242 MDTTRELELEE-AAVGGGLIESSSAAVRLDWRVCIDFCTRSSSDLDGENYCNISAEDVKTEIIEH 305

  Fly   194 Q-----------------------------------------------------AAEAAAAAAQA 205
            :                                                     |..|....:..
  Fly   306 ESELGMLDRRTSTPSPINYYKPTDLTYNHRKRKAMGVEHVVGALTLTPIKVVGGAVGAGTVGSAG 370

  Fly   206 HQQMVAHAAAQ---TSIAAAAAQGHAVKVLEITSLDSNSQ-REIQQAVNHLEHHQQQ-----LHL 261
            |||...|...|   :.:|..|.|.|......::....|.| ::.||...|..|||||     |||
  Fly   371 HQQQQQHQQQQMNHSQLAFQALQQHFSHNHGLSLSHCNGQPQQQQQQHQHQPHHQQQQQQQALHL 435

  Fly   262 Q-QTNGQHQGVPTIQIGRDH------------------YQPL--FGNAGTTAYTTTAAT------ 299
            | |...||......:..||.                  .:|:  ..|..:::...:|||      
  Fly   436 QHQQQQQHSSNMAQKRDRDRDLSTSNGNGNSSNTNNTSLEPIATSSNCSSSSSNNSAATPPKPLL 500

  Fly   300 -----STSHRQDDEYDAIGVNVASKLRSINPTQ-RIVAEKLISDVLFNAQLG 345
                 |.:|  .|||...|..||..:|.:..:: :||.:.||:::|:.|:||
  Fly   501 GGGGLSANH--VDEYGVFGEYVAITIRKLKTSKSKIVVKHLINNLLYEAELG 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5180NP_001138087.1 MADF_DNA_bdg 16..100 CDD:287510 27/87 (31%)
CG6175NP_001261708.1 MADF_DNA_bdg 64..147 CDD:287510 27/87 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21505
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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