DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5180 and CG5953

DIOPT Version :10

Sequence 1:NP_650892.2 Gene:CG5180 / 192508 FlyBaseID:FBgn0043457 Length:355 Species:Drosophila melanogaster
Sequence 2:NP_609796.1 Gene:CG5953 / 34985 FlyBaseID:FBgn0032587 Length:701 Species:Drosophila melanogaster


Alignment Length:344 Identity:63/344 - (18%)
Similarity:92/344 - (26%) Gaps:172/344 - (50%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 GTQSQHMESIIPTS----PDDVEEVAATANNVVVSSQGATLSTISVTPAECVTLVKSEEHQAAEA 198
            |..|...|:..|||    ||                  .|||....:|.....:.::.::....:
  Fly   387 GGGSSSREANDPTSDPIKPD------------------RTLSEAGSSPIPNTNMHEAHKNHLLNS 433

  Fly   199 AAAA-----AQAHQQMVAHAAAQTSIAAAAAQGHAVKVLEITSLDSNSQREIQQAVNHLEHHQQQ 258
            .|..     .|||:|:..|...|..:                   ...|:::||....|:..|.|
  Fly   434 PAGGRSVTPRQAHEQLHHHPHTQHHL-------------------QQQQQQLQQQHQQLQQQQLQ 479

  Fly   259 LHLQQTNGQHQGVPTIQIGRDHYQPLFGNA----------------------------------- 288
            .| ||....|.|...:.|.::......|.|                                   
  Fly   480 QH-QQQQQLHHGHEELDIKQELVDYFHGQAAGGGGGGGGGVVGPAPPPPPESHRSYSSAGEESRL 543

  Fly   289 --------------------------GTTAYT--------------------------------- 294
                                      |:.|.|                                 
  Fly   544 QLVDMAQDLRVAQAKANFGAFILPPRGSDASTPAMPLNMRKLTGAGSAGHMLMNSLLGSRESMSD 608

  Fly   295 -----------TTAATSTSHRQD--------------------DEYDAIGVNVASKLRSINPTQR 328
                       |.:|.|..|.:.                    |:.|.||.||:.|||:::.|||
  Fly   609 GEEPDPDNDEATESAASPGHIKSSVSAQAAVAASAFYAESLNRDDCDFIGSNVSLKLRTMDRTQR 673

  Fly   329 IVAEKLISDVLFNAQLGNL 347
            |:||||||:||:..|...|
  Fly   674 IIAEKLISEVLYYGQFNEL 692

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5180NP_650892.2 MADF_DNA_bdg 16..100 CDD:463144
CG5953NP_609796.1 MADF 85..171 CDD:214738
Blue background indicates that the domain is not in the aligned region.

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