DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5180 and CG31627

DIOPT Version :10

Sequence 1:NP_650892.2 Gene:CG5180 / 192508 FlyBaseID:FBgn0043457 Length:355 Species:Drosophila melanogaster
Sequence 2:NP_724314.2 Gene:CG31627 / 318860 FlyBaseID:FBgn0051627 Length:262 Species:Drosophila melanogaster


Alignment Length:185 Identity:38/185 - (20%)
Similarity:80/185 - (43%) Gaps:17/185 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 EFIEQYQEEECLWQPKHNDYSNHTARNKSYDRLVEKLKEVEPNPDRAMVVRKINSLRSAFRREFR 79
            :.|..|::.:|||..::.|:.|...:::.:|.:.:::|...|:.....::.|:.     ::.|..
  Fly    84 KLIALYEDHKCLWNQRNKDFFNFELKDRIWDAIADEMKADSPSGFWKHMIHKLR-----YKVEME 143

  Fly    80 KTSTKG------DYATRLWYYDKLLFIADHKPKRHELGSKPKRE--LHISFDDEESMEFEDDSHH 136
            :...:|      ....:|:|.|.|||: :|...|.  |.||.||  :|:. ....::|.....:.
  Fly   144 RIQEQGAKFSGESPQPKLFYSDNLLFL-NHMFDRE--GGKPPREIPMHLK-PSGPTLEKNPSRNL 204

  Fly   137 TGTQSQHMESIIPTSPDDVEEVAATANNVVVSSQGATLSTISVTPAECVTLVKSE 191
            ...|.:...:.|......:|::....|:..|.|:.|......:|......|.|::
  Fly   205 RHVQEKRKRTPIREKMASLEKLRNLQNSKFVLSRDAFQKIQKITSGGPYYLTKTK 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5180NP_650892.2 MADF_DNA_bdg 16..100 CDD:463144 18/89 (20%)
CG31627NP_724314.2 MADF_DNA_bdg 85..170 CDD:463144 18/89 (20%)

Return to query results.
Submit another query.