DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5180 and CG30403

DIOPT Version :9

Sequence 1:NP_001138087.1 Gene:CG5180 / 192508 FlyBaseID:FBgn0043457 Length:355 Species:Drosophila melanogaster
Sequence 2:NP_726108.3 Gene:CG30403 / 246595 FlyBaseID:FBgn0050403 Length:302 Species:Drosophila melanogaster


Alignment Length:367 Identity:67/367 - (18%)
Similarity:124/367 - (33%) Gaps:110/367 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 YSRHWLTEFIEQYQEEECLWQPKHNDYSNHTARNKSYDRLVEKLK-EVEPNPDRAMVVR----KI 67
            :|.....:|:|.|..|.|||..:  .|... ||:.:|.|:...:. ::||. :..:.::    ||
  Fly    16 FSDERTVKFVELYGREPCLWNKR--PYLRR-ARSAAYRRIQSGINADIEPY-ESGLTIQGVKMKI 76

  Fly    68 NSLRSAFRREFRKTSTKGDYATRL-WYYDKLLFIADHK---------PKRHELGSKPKRELHISF 122
            .:||:.:.:|.:|..|...|..:. |:.....|:|:..         |:...|..:..|...|..
  Fly    77 KNLRTGYHQELKKIRTIPGYQPKTPWFAPLHGFLAEFLDTNELETSIPQLKRLQIRLTRLKPIKI 141

  Fly   123 DDEESMEFED----DSHHTGTQSQHMESIIPTSPDDVEEVAATANNVVVSSQGATLSTISVTPAE 183
            ..|...:.:|    |.....|.|. :.:::| :|..|||......:  |...|..:|.:...||.
  Fly   142 QTEIKPDPDDLSVPDRPLDATPSS-LFTVLP-APMPVEEPPTPPPS--VPKIGDIISPVHPDPAP 202

  Fly   184 CVTLVKSEEHQAAEAAAAAAQAHQQMVAHAAAQTSIAAAAAQGHAVKVLEITSLDSNSQREIQQA 248
                                       ...|....::.|.:.....:||.:....|.:.|     
  Fly   203 ---------------------------VPIAGNCPLSTACSISEKSEVLGLGLGVSAAGR----- 235

  Fly   249 VNHLEHHQQQLHLQQTNGQHQGVPTIQIGRDHYQPLFGNAGTTAYTTTAATSTSHRQDDEYDAIG 313
                           |||...||                              ..|.:||:...|
  Fly   236 ---------------TNGVGLGV------------------------------EMRGEDEFTYFG 255

  Fly   314 VNVASKLRSINPTQRIVAEKLISDVL------FNAQLGNLTV 349
            ::||:::|::.....::.:..|..:|      .|...|::.:
  Fly   256 LSVAAQIRNMPLASAMLMQSKIQYMLSMERRKINGHPGDMDI 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5180NP_001138087.1 MADF_DNA_bdg 16..100 CDD:287510 23/89 (26%)
CG30403NP_726108.3 GT1 24..103 CDD:304916 22/82 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0009991
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21505
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.010

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