DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ndf and GLYR1

DIOPT Version :9

Sequence 1:NP_001188767.1 Gene:Ndf / 192507 FlyBaseID:FBgn0043456 Length:603 Species:Drosophila melanogaster
Sequence 2:XP_016879275.2 Gene:GLYR1 / 84656 HGNCID:24434 Length:602 Species:Homo sapiens


Alignment Length:587 Identity:191/587 - (32%)
Similarity:302/587 - (51%) Gaps:61/587 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 DLIWAKMKGFTPWPGMIVDPPLDLLSQQRRANTKCVF--FFGSRNFAWIEENNIKPFEGPWKEEL 86
            ||:|.|:..:.||||.||:||.||   ::....||.|  |||:.:.|||:...:||:.. .|||:
Human    60 DLVWGKLGRYPPWPGKIVNPPKDL---KKPRGKKCFFVKFFGTEDHAWIKVEQLKPYHA-HKEEM 120

  Fly    87 AKVSKPAAFRHAMTDIEKYIDDPAEVDEQVNKSCGAPNHATEADFDKIR--DGLDSEEIVGEEAT 149
            .|::|...|:.|:..:|:::......|:..:.:.....:...:..::.|  .|.:..::...|..
Human   121 IKINKGKRFQQAVDAVEEFLRRAKGKDQTSSHNSSDDKNRRNSSEERSRPNSGDEKRKLSLSEGK 185

  Fly   150 ADGNNGVVAHVV--GSPDEGDGLDVEINADSSASPVTSPAVTTKAAGKRTPKAKSVAATSVKSTK 212
            ...|.|.....|  ||.:.|           |.||:       |.|.:::|:           .:
Human   186 VKKNMGEGKKRVSSGSSERG-----------SKSPL-------KRAQEQSPR-----------KR 221

  Fly   213 GSAKSAQKRRTSAQQSP-----SGPSNAKRGKRDVSGEALQDADEASSTPTGRRRVETDALLASI 272
            |.....:|..|..:.|.     :||..|.:.:...| |.::|||.           .....|.|.
Human   222 GRPPKDEKDLTIPESSTVKGMMAGPMAAFKWQPTAS-EPVKDADP-----------HFHHFLLSQ 274

  Fly   273 AAKRAPNAIALLDRPVVTRPEAQVIDMSSRSNTLADRDIVPSEQTFGFLGLGMMGSTIVKDLIYT 337
            ..|.|....|:..:..:...|.....:.:..:|..:..|.|:::..||||||:|||.||.:|:..
Human   275 TEKPAVCYQAITKKLKICEEETGSTSIQAADSTAVNGSITPTDKKIGFLGLGLMGSGIVSNLLKM 339

  Fly   338 GHKVVVWNRTIDKCQPFAEAGAEVKDTPMDVVEAADVIFCCVSDPKGAKDLVFGNCGVLQ-LKDL 401
            ||.|.|||||.:||..|.:.||.:..||.:||...|:.|.||||||.||| |.|..|||| ::. 
Human   340 GHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKD-VLGPSGVLQGIRP- 402

  Fly   402 NNKAYVEMSTIDPDTSLDIGEGIKQCNGRYLEAQIHGSRQEAAEGMLIILAGGDRSVFEECHSCF 466
             .|.||:|||:|.||..::.:.|....||:|||.:.|::|.:.:|||:|||.|||.::|:|.|||
Human   403 -GKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVILAAGDRGLYEDCSSCF 466

  Fly   467 KTIAKNTFFLGTDIGNACKVNLILQTILGVSLVGLAEALALADRFSISLNDIIDIFDLTSMKSPM 531
            :.:.|.:|||| ::|||.|:.||:..:.|..:..:||.|.||.....|...::||.:...:.|..
Human   467 QAMGKTSFFLG-EVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVTGQSQQTLLDILNQGQLASIF 530

  Fly   532 LLAKGKEMAKGDFNPQQPLSHMQRDLRLVLNMAENLDQSMPVTSITNEVFKHTKRLGYSEHDSSA 596
            |..|.:.:.:|:|.|...|.::|:||||.:.:.:.::...|:.:..|||:|..|.|..|::|.||
Human   531 LDQKCQNILQGNFKPDFYLKYIQKDLRLAIALGDAVNHPTPMAAAANEVYKRAKALDQSDNDMSA 595

  Fly   597 VF 598
            |:
Human   596 VY 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NdfNP_001188767.1 N_Pac_NP60 20..106 CDD:99897 33/83 (40%)
NAD_binding_2 316..477 CDD:281445 80/161 (50%)
MmsB 319..597 CDD:224995 119/278 (43%)
NAD_binding_11 481..597 CDD:291499 37/115 (32%)
GLYR1XP_016879275.2 N_Pac_NP60 56..140 CDD:99897 33/83 (40%)
DUF4603 137..>223 CDD:317743 17/114 (15%)
NAD_bind_amino_acid_DH <260..>352 CDD:330244 32/102 (31%)
MmsB 318..600 CDD:224995 121/284 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165156353
Domainoid 1 1.000 164 1.000 Domainoid score I3950
eggNOG 1 0.900 - - E1_COG2084
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H12525
Inparanoid 1 1.050 298 1.000 Inparanoid score I2728
Isobase 1 0.950 - 0 Normalized mean entropy S6039
OMA 1 1.010 - - QHG45921
OrthoDB 1 1.010 - - D379125at33208
OrthoFinder 1 1.000 - - FOG0002426
OrthoInspector 1 1.000 - - oto88897
orthoMCL 1 0.900 - - OOG6_100977
Panther 1 1.100 - - LDO PTHR43580
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4589
SonicParanoid 1 1.000 - - X4119
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1716.750

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