DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ndf and glyr1

DIOPT Version :10

Sequence 1:NP_001188767.1 Gene:Ndf / 192507 FlyBaseID:FBgn0043456 Length:603 Species:Drosophila melanogaster
Sequence 2:NP_001025665.1 Gene:glyr1 / 595057 XenbaseID:XB-GENE-958848 Length:534 Species:Xenopus tropicalis


Alignment Length:608 Identity:202/608 - (33%)
Similarity:304/608 - (50%) Gaps:121/608 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 DLIWAKMKGFTPWPGMIVDPPLDLLSQQRRANTKCVF--FFGSRNFAWIEENNIKPFEGPWKEEL 86
            ||:|.|:..:.||||.||:||.||   ::....||:|  |||:.:.|||:...:||:.. .|||:
 Frog    10 DLVWGKLGRYPPWPGKIVNPPKDL---KKPRGKKCLFVKFFGTEDHAWIKVEQLKPYHA-HKEEM 70

  Fly    87 AKVSKPAAFRHAMTDIEKYIDDPAEVDEQVNKSCGAPNHATEADFDKIRDGLDSEEIVGEEATAD 151
            .|.:|...|:.|:..:|:::           |...|..||.|.:        .|:|         
 Frog    71 IKANKGKRFQQAVDAVEEFL-----------KKAKAKEHAKEHN--------SSDE--------- 107

  Fly   152 GNNGVVAHVVGSPDEGDGLDVEINADSSASPVTSPAVTTKAAGKRTPKAKSVAATSVKSTKGSAK 216
                     .|...||.|                    .|..|::..          ||::.|:.
 Frog   108 ---------KGKKGEGKG--------------------KKQTGEKRR----------KSSESSSH 133

  Fly   217 SAQKRRTSAQQSPSGPSNAKRGK--RDVSGEALQDADEASSTPTGRRRV-------------ETD 266
            |.|||  |..|||     .|||:  :|       |.|..|..|:..:::             .|:
 Frog   134 SPQKR--SRDQSP-----RKRGRPPKD-------DKDSPSPQPSSLKKLAMKTVSRFSWPPPSTE 184

  Fly   267 ALLAS----IAAKRAPNAIALLDRPVVT------RPEAQVIDMSSRSNTLADR-----DIVPSEQ 316
            ..|.|    |...|......:|.:|.||      |.:....|..|.|...||.     :|:|:::
 Frog   185 DDLGSDSWLIHGHRTLGTEMILKKPSVTYQAITKRLKISEEDSGSTSIQAADSTAINGNIIPTDK 249

  Fly   317 TFGFLGLGMMGSTIVKDLIYTGHKVVVWNRTIDKCQPFAEAGAEVKDTPMDVVEAADVIFCCVSD 381
            ..||||||:|||.||.:|:..||.|.|||||.:||..|.:.||.:..||.:||...|:.|.||:|
 Frog   250 KIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGAHMGRTPAEVVSTCDITFACVAD 314

  Fly   382 PKGAKDLVFGNCGVLQ-LKDLNNKAYVEMSTIDPDTSLDIGEGIKQCNGRYLEAQIHGSRQEAAE 445
            ||.|||||.|..|||| ::.  .|.||:|||:||:|..::.:.|....||:|||.:.|::|.:.:
 Frog   315 PKAAKDLVLGPSGVLQGIRP--GKCYVDMSTVDPETVAELAQVIVSRGGRFLEAPVSGNQQLSND 377

  Fly   446 GMLIILAGGDRSVFEECHSCFKTIAKNTFFLGTDIGNACKVNLILQTILGVSLVGLAEALALADR 510
            |||:|||.||:.|:|:|.|||..:.|.:|||| ::|||.::.|||..:.|..:..:||.:.||..
 Frog   378 GMLVILAAGDQGVYEDCSSCFLAMGKTSFFLG-EVGNAARMMLILNMVQGSFMATIAEGMTLAQV 441

  Fly   511 FSISLNDIIDIFDLTSMKSPMLLAKGKEMAKGDFNPQQPLSHMQRDLRLVLNMAENLDQSMPVTS 575
            ...|...::||.:...:.|..|..|.:.:.:|:|.|...|.::|:||||.:.:.::::...|:.:
 Frog   442 TGQSQQTLLDILNQGQLASIFLDQKCQNILQGNFKPDFYLKYIQKDLRLAIALGDSVNHPTPMAA 506

  Fly   576 ITNEVFKHTKRLGYSEHDSSAVF 598
            ..|||:|..|.|..|::|.|||:
 Frog   507 AANEVYKRAKALDQSDNDMSAVY 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NdfNP_001188767.1 PWWP_GLYR1 20..106 CDD:438961 33/83 (40%)
MmsB 319..598 CDD:441687 119/279 (43%)
glyr1NP_001025665.1 PWWP_GLYR1 9..90 CDD:438961 33/83 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 93..168 31/144 (22%)
Interaction with histone H3. /evidence=ECO:0000250|UniProtKB:Q49A26 190..193 0/2 (0%)
Dehydrogenase domain. /evidence=ECO:0000250|UniProtKB:Q49A26 242..534 122/291 (42%)
MmsB 249..532 CDD:441687 120/284 (42%)

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