DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5986 and Sde2

DIOPT Version :10

Sequence 1:NP_651207.1 Gene:CG5986 / 192506 FlyBaseID:FBgn0043455 Length:232 Species:Drosophila melanogaster
Sequence 2:XP_038946483.1 Gene:Sde2 / 289315 RGDID:1305572 Length:459 Species:Rattus norvegicus


Alignment Length:242 Identity:91/242 - (37%)
Similarity:127/242 - (52%) Gaps:41/242 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 SCGDHVKCDELYSRIAEKTNLQPGEYYLVSNGKRLEGEISSGDVHC-------VLRQLGGKGGFG 71
            |.|..|: |.:| |..|:..:....:::..||..    :::||..|       ..|..|||||||
  Rat    24 SVGCSVR-DVIY-RHCEEQEIPVECFFVKCNGVL----VAAGDKVCHGAVYSLEPRLRGGKGGFG 82

  Fly    72 SMLRAIGAQIEKTTNREACRDLSGRRLRDINEEKRV-----------RAWLEKQGEREREAEERK 125
            |||||:|||||||||||||||||||||||:|.||.:           ..|:::|.|||.|.|:|:
  Rat    83 SMLRALGAQIEKTTNREACRDLSGRRLRDVNHEKAIPGQAPQREHWMAEWVKQQAEREAEKEQRR 147

  Fly   126 KRKIEKLLAVPKHDFKDDKYEEARANLTEKVNDAFEEGLKQAEENKEKGVEEATSSGTKRKSPAV 190
            ..::::.||.|.|.|....|:.....:.|::.|:..:|: ||..:|....|...:    ||.|..
  Rat   148 LERLQRKLAEPAHCFASPDYQRQCHEMAERLEDSVLKGM-QAASSKVVSAEVTET----RKRPNR 207

  Fly   191 DKTK--AKKKKKGTLWI--------DDDISGS--DSDSDDSEEEPKT 225
            .||.  |..|||...|:        :...:||  ||:.||.|:.|.|
  Rat   208 SKTDQGAGAKKKRCFWLGMEGLEAAEGSSTGSSDDSEDDDHEDAPGT 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5986NP_651207.1 Ubl1_cv_Nsp3_N-like <58..113 CDD:475130 41/72 (57%)
Sde2XP_038946483.1 Ubl1_cv_Nsp3_N-like <69..157 CDD:475130 48/87 (55%)
SDE2_2C 372..452 CDD:463835
Blue background indicates that the domain is not in the aligned region.

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