DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5986 and sde2

DIOPT Version :10

Sequence 1:NP_651207.1 Gene:CG5986 / 192506 FlyBaseID:FBgn0043455 Length:232 Species:Drosophila melanogaster
Sequence 2:NP_594019.1 Gene:sde2 / 2542222 PomBaseID:SPAC31G5.18C Length:263 Species:Schizosaccharomyces pombe


Alignment Length:232 Identity:67/232 - (28%)
Similarity:103/232 - (44%) Gaps:35/232 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 HVKCDELYSRIAEKTNLQPGEYYLVSNGK---------RLEGEISSGDVHCVL--RQLGGKGGFG 71
            ||..|. |..:.|:.       ||....:         :|||:.:|..::..|  |.||||||||
pombe    33 HVLGDS-YETVLERA-------YLTHQSRIVHPDIQLCKLEGKSTSAHLNLTLCTRVLGGKGGFG 89

  Fly    72 SMLRAIGAQIEK----TTNREACRDLSGRRLRDINEEKRVRAWLEKQGEREREAEERKKRKIEKL 132
            |.|||.|.::.|    ..|:::||||.|.||..|.:.|.:..:|.|:....|..:|.||:|:.|:
pombe    90 SQLRAAGGRMSKKRNEQENQDSCRDLDGNRLGTIRQAKELSEYLAKKPAETRAKKEAKKQKLNKV 154

  Fly   133 LAVPKHD--FKDDKYEEARANLTEKVNDAFEEGLKQAEENKEKGVEEATSSGTKRKSPAVDKTKA 195
            ||.....  |.|.:|.|........|.|||:..|..     .:|...|:|..:.......|:...
pombe   155 LAADSSSSRFDDHEYLEDLEQSVSNVRDAFQNSLLY-----RRGSTSASSFSSGSNGATTDEPAE 214

  Fly   196 KKKKKGTLWIDD-----DISGSDSDSDDSEEEPKTQK 227
            |:.:.....|:.     ..|.|.::::..:.|.:|.|
pombe   215 KEARNNNSSINSWSRRMQASESSNEAEGEDSESQTSK 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5986NP_651207.1 Ubl1_cv_Nsp3_N-like <58..113 CDD:475130 27/60 (45%)
sde2NP_594019.1 Sde2_N_Ubi 4..160 CDD:372432 47/134 (35%)

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