DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5986 and sde-2

DIOPT Version :10

Sequence 1:NP_651207.1 Gene:CG5986 / 192506 FlyBaseID:FBgn0043455 Length:232 Species:Drosophila melanogaster
Sequence 2:NP_506378.1 Gene:sde-2 / 179852 WormBaseID:WBGene00009996 Length:500 Species:Caenorhabditis elegans


Alignment Length:230 Identity:76/230 - (33%)
Similarity:115/230 - (50%) Gaps:51/230 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 KTNLQPGEYYLVSNGKRLEG-----------EISSGDVHCVLRQLGGKGGFGSMLRAIGAQIEKT 84
            :||.....:|::.|||.:|.           .:.....|  ||..||||||||:||:.  ::.|:
 Worm   126 RTNFPSDSFYVMHNGKIIENFNAFIDENMGQSLVKYSFH--LRVRGGKGGFGSLLRSF--RVNKS 186

  Fly    85 TNREACRDLSGRRLRDINEEKRVRAWLEKQGEREREAEERKKRKIEKLLAVP-KHDFKDDKYEEA 148
            ||:...|||:|||:..::||.:::.:||||..:|:|.:|::|.|:|||.|.| ||.|:|..|...
 Worm   187 TNKLMMRDLNGRRMASVDEEAKLKRYLEKQARKEQELKEKRKAKLEKLTAGPAKHMFEDQDYLSR 251

  Fly   149 RANLTEKVNDAFEEGL------------KQAEENK-------EKGVEEATS-----SGTKRK--S 187
            |..:..|..||.|.|.            .:.:|||       :...|:.|.     .|.|||  :
 Worm   252 REEIINKTEDACEAGFALMLEMKRNSRKSKEQENKNDEDEDDDVNAEDVTDLFNDRGGRKRKIAA 316

  Fly   188 PAVDKTKAKKKKKGTLWIDDDISGSDSDSDDSEEE 222
            |::.:....|:      |:|:   ||...||||.|
 Worm   317 PSIGEDGGNKR------INDE---SDDSEDDSENE 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5986NP_651207.1 Ubl1_cv_Nsp3_N-like <58..113 CDD:475130 25/54 (46%)
sde-2NP_506378.1 Ubl1_cv_Nsp3_N-like <149..236 CDD:475130 36/90 (40%)
SDE2_2C 398..473 CDD:463835
Blue background indicates that the domain is not in the aligned region.

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