DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gr59c and Gr59a

DIOPT Version :9

Sequence 1:NP_726292.1 Gene:Gr59c / 192481 FlyBaseID:FBgn0041235 Length:397 Species:Drosophila melanogaster
Sequence 2:NP_726287.2 Gene:Gr59a / 117485 FlyBaseID:FBgn0045483 Length:367 Species:Drosophila melanogaster


Alignment Length:406 Identity:88/406 - (21%)
Similarity:167/406 - (41%) Gaps:83/406 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 YGLAVGVSNFEVDWLTGEAIATRRTTIYAAVHNASLITLLILFNLGNNSLKSEFISARYLHEYFF 79
            |.:.:|::::|.  :.|:...:|.|.||..:.||..:|||......:..|.|   :|.::..|..
  Fly    11 YAVFIGMTSYET--MGGKFRQSRITRIYCLLINAIFLTLLPSAFWKSAKLLS---TADWMPSYMR 70

  Fly    80 M---LMTAVRISAVLLSLITRWYQRSRFIRIWNQILALVRD--RPQVVRGRWYRRSIILKFVFCV 139
            :   :|..:..:|:..:||:|.|:.:..:.:...:|.:.|:  |.........||...|| .|.:
  Fly    71 VTPYIMCTINYAAIAYTLISRCYRDAMLMDLQRIVLEVNREMLRTGKKMNSLLRRMFFLK-TFTL 134

  Fly   140 LSDSLHTISDV-----SAQR-KRITADLIVKLSL-LATLTTIFNMIVCQYYLAMVQVIGLYKILL 197
            ....|..|..|     .||. ..:...|:|.:|| :..:.|.|      |:.::..:...|..:.
  Fly   135 TYSCLSYILAVFIYQWKAQNWSNLCNGLLVNISLTILFVNTFF------YFTSLWHIARGYDFVN 193

  Fly   198 QDLRCLVRQAECICSIRNRRG----GVYSIQCCSLADQLDLIAER---HYFLKDRLDEMSDLFQI 255
            |.|..:|   .|......|:.    |::     :|...|...|.|   ||             ..
  Fly   194 QQLNEIV---ACQSMDLERKSKELRGLW-----ALHRNLSYTARRINKHY-------------GP 237

  Fly   256 QSLSMSLVYFFSTMGSIYFSVCSILYSSTG--------FGS-TYWGLLLIVLSTASFYMDNWLSV 311
            |.|:|...||   :.||..:....:||:|.        ||| .||      :.:..|::::::..
  Fly   238 QMLAMRFDYF---IFSIINACIGTIYSTTDQEPSLEKIFGSLIYW------VRSFDFFLNDYICD 293

  Fly   312 NIGFHIRDQQDELFRVLADRTLFYRELDNRLEAAFENFQLQLASNRHEFYVMGLFKMERGRLIAM 376
            .:..:  ..|.:.|   |..:....||.:.|        :..:|.|.:..|.||:::.:.:.:.|
  Fly   294 LVSEY--QMQPKFF---APESSMSNELSSYL--------IYESSTRLDLLVCGLYRVNKRKWLQM 345

  Fly   377 LSSVITHTMVLVQWEI 392
            :.|::.|:.:|.|:.:
  Fly   346 VGSIVVHSSMLFQFHL 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr59cNP_726292.1 7tm_7 9..394 CDD:285581 88/406 (22%)
Gr59aNP_726287.2 7tm_7 7..363 CDD:285581 88/406 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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