DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ptgs1 and cd

DIOPT Version :9

Sequence 1:NP_032995.1 Gene:Ptgs1 / 19224 MGIID:97797 Length:602 Species:Mus musculus
Sequence 2:NP_651081.1 Gene:cd / 42681 FlyBaseID:FBgn0263986 Length:830 Species:Drosophila melanogaster


Alignment Length:586 Identity:123/586 - (20%)
Similarity:207/586 - (35%) Gaps:174/586 - (29%)


- Green bases have known domain annotations that are detailed below.


Mouse    81 RNSLRPSPSFTHFLLTHGYWLWEFVNATFIR-----EVLMRLVLTVRS--------NLIPSPPTY 132
            |:|.....:||..|...|.::...:.||.:.     |.:...|...|.        :::|..|.|
  Fly   276 RSSYETDSNFTVMLAVFGQFMDHDITATSLTTSQEGESIDCCVAATREQHPECYPVDILPDDPYY 340

Mouse   133 NSAHDYISWESFSNVSYYTRILPSVPKDCPTPMGTKGKKQLPDVQLLAQQLLLRREFIPAPQGTN 197
            ...:  ||..:|             .:..|.|.|..|    |.:||                  |
  Fly   341 KQYN--ISCMNF-------------VRSAPAPTGRFG----PRMQL------------------N 368

Mouse   198 ILFAFFAQHFTHQFFKTSGKMGPGFTKALGHGVDLGHIYGDNLERQYHLRLFKDGKLKYQVLDG- 261
            ...||                           :|...:||:..:||..||.|.:|.|:..|.|. 
  Fly   369 QATAF---------------------------IDASVVYGNLEQRQNQLRSFINGSLRMFVTDDG 406

Mouse   262 -EVYPPSVEQASVLMRYPPGVPPERQMAVGQEVFG----------LLPGLMLFSTIWLREHNRVC 315
             ::.|.|...|.       |....:...:|:..|.          ||..:.|   :|.|.||.:.
  Fly   407 RQLLPISSNPAD-------GCNRVQMTRLGKYCFESGDDRANENLLLTSMHL---LWARHHNYLA 461

Mouse   316 DLLKEEHPTWDDEQLFQTTRLILIGETIKIVIEEYVQHLSGY-------FLQLK--------FDP 365
            ..|:|::|.|:||:|:|..|.||..:...|...|::..|.|.       .|..|        :||
  Fly   462 RQLQEQNPHWEDERLYQEARKILGAQMAHITYNEFLPVLLGKNISEAKGLLPAKHNLNAPDTYDP 526

Mouse   366 EL-------LFRAQFQYRNRIAMEFNHLYHWHPLMPNSFQVGSQEYSYE-----QFLFNT-SMLV 417
            |:       ...|.|::.             |.|:|..|.:.....:.|     :.|||. |:..
  Fly   527 EVDPSIANCFAAAAFRFA-------------HTLLPGLFNISRDNSTPEAIELHKMLFNPFSLWA 578

Mouse   418 DYGVE-ALVDA-----------FSRQRAGRIGGGRNFDYHVLHVAVDV----IKESREMRLQPFN 466
            ::|:: ||:.|           ||.:...::..|...| .|....:|:    |:..|:..:..:.
  Fly   579 EHGIDHALMTAANTPVMQVDRFFSLEVTQKLFEGTAED-RVPLCGLDLVSLNIQRGRDHGIPSYP 642

Mouse   467 EYRKRFGLKPYTSFQELTGEKEMAA--ELEELYGDIDALEFYPGLLLEKCQPNSIFGESMIEMGA 529
            .:|:...|....:::|::...:.|.  .:.::|.....::.|.|.|.|.....:|||..:..|.:
  Fly   643 VFRRHCRLPTVDTWEEMSQAIDNATLDSIRQIYESPQDVDVYTGALSEPPLDGAIFGPLLSCMVS 707

Mouse   530 PFSLKGLLGNPICSPEYWKPSTFGGDVGFNLVNTA-----SLKKLVCLN----TKTCPYVSFRVP 585
            ...|:..||:     .:|.....|.. .|.....|     ||..::|.|    |:...:|..|:.
  Fly   708 DQFLRLKLGD-----SHWYERKMGPQ-KFTKAQLAEIYKTSLAAIICRNSDGITRVREHVMQRLR 766

Mouse   586 D 586
            |
  Fly   767 D 767

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptgs1NP_032995.1 EGF_CA 35..72 CDD:238011
prostaglandin_endoperoxide_synthase 92..578 CDD:188648 116/565 (21%)
cdNP_651081.1 An_peroxidase 218..755 CDD:281139 119/572 (21%)
peroxinectin_like 364..750 CDD:188655 96/460 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2408
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.