DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptgs1 and Pxd

DIOPT Version :10

Sequence 1:NP_032995.1 Gene:Ptgs1 / 19224 MGIID:97797 Length:602 Species:Mus musculus
Sequence 2:NP_996223.1 Gene:Pxd / 2768671 FlyBaseID:FBgn0004577 Length:690 Species:Drosophila melanogaster


Alignment Length:403 Identity:99/403 - (24%)
Similarity:158/403 - (39%) Gaps:93/403 - (23%)


- Green bases have known domain annotations that are detailed below.


Mouse   230 VDLGHIYGDNLERQYHLRLFKDGKLKYQVLDGEVYPP----------SVEQASVLMRYPPGVPPE 284
            :||..:||:::::...:|.|:.|::..:..:|..:.|          :|:.:.|..|       .
  Fly   270 LDLSLVYGNSIQQNSDIREFQGGRMIVEERNGAKWLPLSRNVTGDCDAVDASEVCYR-------S 327

Mouse   285 RQMAVGQEVFGLLPGLMLFSTIWLREHNRVCDLLKEEHPTWDDEQLFQTTRLILIGETIKIVIEE 349
            ..:.|.|.     |||.:..||.||||||:.|.|...:|.:||..|||..|        ||.|.:
  Fly   328 GDVRVNQN-----PGLAILQTILLREHNRIADALSALNPHYDDRTLFQEAR--------KINIAQ 379

Mouse   350 YVQHLSGY-FLQLKFDPELLFRAQFQYRNRIAMEFNHL-YHWHPLMPNSFQVGSQEYSYEQFLFN 412
            | |.:|.| :|.:....|.:.:.:..|:.......|.. .:..|.:.|.....:..|.:.|....
  Fly   380 Y-QQISYYEWLPIFLGGENMLKNRLIYKAPSGSYINDFDPNIDPSVLNEHATAAFRYFHSQIEGR 443

Mouse   413 TSMLVD----YGVEALVDAFSRQRAGRIGGGRNFDY----HVL--HVAVDV-----IKESREMRL 462
            ..:|.:    .|...|.|.|:  |.|.|..|.|||.    |..  ....|:     ||.....|.
  Fly   444 LDLLSELRQVLGSLTLSDWFN--RPGIIEVGDNFDSLTRGHATQPEELTDINFDRQIKHFLFRRN 506

Mouse   463 QPFN--------EYRKRFGLKPYTSFQELTGEKEMAAELEELYGDIDALEFYPGLL--LEKCQPN 517
            .||.        :..:..||..|...:|..|.:.  |...|.|||:    ..|.:|  |:...|:
  Fly   507 MPFGSDLRSLDIQRNRDHGLASYNDMREFCGLRR--AHSWEGYGDL----ISPPILEKLKSLYPS 565

Mouse   518 SIFGESM-IEMGAPFS--LKGLLGNP----ICSPEYWKPSTFGGD----------VGF-----NL 560
            .   |.: :.:||...  :.|.|..|    |.:.::::  |..||          .||     ..
  Fly   566 H---EDVDLTVGASLEAHVAGALAGPTFLCILTEQFYR--TRVGDRFFFENGDKLTGFTPDQLEE 625

Mouse   561 VNTASLKKLVCLN 573
            :..||:.:|:|.|
  Fly   626 LRKASMARLLCDN 638

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptgs1NP_032995.1 EGF_CA 35..72 CDD:238011
prostaglandin_endoperoxide_synthase 92..578 CDD:188648 99/403 (25%)
PxdNP_996223.1 An_peroxidase 105..650 CDD:460804 99/403 (25%)
Blue background indicates that the domain is not in the aligned region.

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