DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptf1a and CG33557

DIOPT Version :9

Sequence 1:NP_061279.2 Gene:Ptf1a / 19213 MGIID:1328312 Length:324 Species:Mus musculus
Sequence 2:NP_001014730.1 Gene:CG33557 / 3346145 FlyBaseID:FBgn0053557 Length:150 Species:Drosophila melanogaster


Alignment Length:103 Identity:34/103 - (33%)
Similarity:51/103 - (49%) Gaps:11/103 - (10%)


- Green bases have known domain annotations that are detailed below.


Mouse   126 AVLSPGARLGGLNGAAAAAAARRRRRVRSEA-----------ELQQLRQAANVRERRRMQSINDA 179
            ||.:..:...|....:.|||.....::..||           ..:..||..|.|||.|..::|.|
  Fly    16 AVFAQDSNSSGSASGSGAAADSEDSQIGQEANPGGQENQGNHRRRPPRQKINARERYRTFNVNSA 80

Mouse   180 FEGLRSHIPTLPYEKRLSKVDTLRLAIGYINFLSELVQ 217
            :|.||:.|||.|..::|||::.:|||..||..||..::
  Fly    81 YEALRNLIPTEPMNRKLSKIEIIRLASSYITHLSSTLE 118

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptf1aNP_061279.2 HLH 162..217 CDD:238036 26/54 (48%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 302..324
CG33557NP_001014730.1 HLH 67..119 CDD:197674 24/52 (46%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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