DRSC/TRiP Functional Genomics Resources

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Protein Alignment Psma2 and Prosalpha2

DIOPT Version :9

Sequence 1:NP_032970.2 Gene:Psma2 / 19166 MGIID:104885 Length:234 Species:Mus musculus
Sequence 2:NP_524328.1 Gene:Prosalpha2 / 41531 FlyBaseID:FBgn0086134 Length:234 Species:Drosophila melanogaster


Alignment Length:233 Identity:181/233 - (77%)
Similarity:209/233 - (89%) Gaps:0/233 - (0%)


- Green bases have known domain annotations that are detailed below.


Mouse     1 MAERGYSFSLTTFSPSGKLVQIEYALAAVAGGAPSVGIKAANGVVLATEKKQKSILYDERSVHKV 65
            ||...||||||||||||||||:|||||||:||||||||.|:||||:|||.|.||.||::.|||:|
  Fly     1 MATERYSFSLTTFSPSGKLVQLEYALAAVSGGAPSVGIIASNGVVIATENKHKSPLYEQHSVHRV 65

Mouse    66 EPITKHIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPF 130
            |.|..|||:||||||||||:||.:|||:||.|||.|:||||.:|||||||::|||||||||||||
  Fly    66 EMIYNHIGMVYSGMGPDYRLLVKQARKIAQTYYLTYKEPIPVSQLVQRVATLMQEYTQSGGVRPF 130

Mouse   131 GVSLLICGWNEGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAILTL 195
            |||||||||:..||||:|||||||||||||||||||.|||||||||||:|||||:||:|||||||
  Fly   131 GVSLLICGWDNDRPYLYQSDPSGAYFAWKATAMGKNAVNGKTFLEKRYSEDLELDDAVHTAILTL 195

Mouse   196 KESFEGQMTEDNIEVGICNEAGFRRLTPTEVRDYLAAI 233
            ||.|||:||.||||:|||::.||:||.|..::||||:|
  Fly   196 KEGFEGKMTADNIEIGICDQNGFQRLDPASIKDYLASI 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Psma2NP_032970.2 proteasome_alpha_type_2 6..231 CDD:239719 176/224 (79%)
Prosalpha2NP_524328.1 proteasome_alpha_type_2 6..231 CDD:239719 176/224 (79%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167835204
Domainoid 1 1.000 304 1.000 Domainoid score I1380
eggNOG 1 0.900 - - E1_KOG0181
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2081
Inparanoid 1 1.050 378 1.000 Inparanoid score I2053
Isobase 1 0.950 - 0 Normalized mean entropy S257
OMA 1 1.010 - - QHG54016
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 1 1.000 - - FOG0003690
OrthoInspector 1 1.000 - - oto92191
orthoMCL 1 0.900 - - OOG6_101969
Panther 1 1.100 - - LDO PTHR11599
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1004
SonicParanoid 1 1.000 - - X2555
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1716.750

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