DRSC/TRiP Functional Genomics Resources

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Protein Alignment htas-1 and His2A:CG33832

DIOPT Version :9

Sequence 1:NP_501718.1 Gene:htas-1 / 191549 WormBaseID:WBGene00014240 Length:145 Species:Caenorhabditis elegans
Sequence 2:NP_001027331.1 Gene:His2A:CG33832 / 3772632 FlyBaseID:FBgn0053832 Length:124 Species:Drosophila melanogaster


Alignment Length:124 Identity:62/124 - (50%)
Similarity:82/124 - (66%) Gaps:2/124 - (1%)


- Green bases have known domain annotations that are detailed below.


 Worm    15 STKTSSAKKKKKRISRSTRSGLTFPVGRIHRKLRETTRGKQRISAGASVFMAATLEYLTTELMEM 79
            |.:....|.|.|..|||.|:||.||||||||.||:.... :|:.|||.|::||.:|||..|::|:
  Fly     2 SGRGKGGKVKGKAKSRSNRAGLQFPVGRIHRLLRKGNYA-ERVGAGAPVYLAAVMEYLAAEVLEL 65

 Worm    80 SAIAANESKKSRVTPRHLHLAIYGDQETAQLLDKVTLPQGGVTPMPIHPSLLPKKKAKE 138
            :..||.::||:|:.||||.|||..|:|..:||..||:.||||.| .|...|||||..|:
  Fly    66 AGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLP-NIQAVLLPKKTEKK 123

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
htas-1NP_501718.1 H2A 27..132 CDD:238029 53/104 (51%)
H2A 29..132 CDD:197711 53/102 (52%)
His2A:CG33832NP_001027331.1 PTZ00017 16..124 CDD:185399 58/110 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5262
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53554
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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