DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prss12 and Loxl2

DIOPT Version :9

Sequence 1:NP_032965.1 Gene:Prss12 / 19142 MGIID:1100881 Length:761 Species:Mus musculus
Sequence 2:NP_523806.2 Gene:Loxl2 / 37485 FlyBaseID:FBgn0034660 Length:511 Species:Drosophila melanogaster


Alignment Length:448 Identity:123/448 - (27%)
Similarity:178/448 - (39%) Gaps:124/448 - (27%)


- Green bases have known domain annotations that are detailed below.


Mouse   270 DGVIRLAGGKSTHEGRLEVYYKGQWGTVCDDGWTEMNTYVACRLLGFKYGKQSSVNHFDG-SNRP 333
            :|.|||.||.:.:||.:||.:.|:||.||||.|......:.||.|||...::.:.:.|.| :.|.
  Fly    58 EGAIRLVGGDNEYEGNIEVLHNGKWGAVCDDEWDSTEADIVCRQLGFPGMRRYTRSGFFGPARRR 122

Mouse   334 IWLDDVSCSGKEVSFIQCSRRQWGRHDCSHREDVGLTCYP--------------DSDGHRLSPGF 384
            .|:|::.|.|.|...:.|....||.:||...|..|:.|||              |.|    .|.:
  Fly   123 FWMDNLFCEGHEQELVDCHFEGWGENDCEPGEAAGVVCYPPENALIPMATPIIRDED----LPKY 183

Mouse   385 PI--------RLVDGENKKEGRVEVFVN-GQWGTICDDGWTDKHAAVICRQLGYKGPARARTMAY 440
            ||        ||..|.::.||||||.:: |:||::|.|||:...|.|:|||||....:.|....:
  Fly   184 PIHSRSRLYVRLRGGRSRIEGRVEVSLDGGRWGSVCADGWSLLEANVVCRQLGLGYASEAFQTDF 248

Mouse   441 FG--EGKGPIHMDNVKCTGNEKALADCVKQDI--GRHNCRHSED--AGVICDYLE---------- 489
            ||  ....|: :...:|.|||..||||:..|.  |..:|..:..  |.|||||:.          
  Fly   249 FGGFNVSRPV-LSGSECYGNETELADCLHHDASQGIISCHGNRQHVAAVICDYIAPDLVVDYLEI 312

Mouse   490 KKASSSGNKEMLSSGCGL------------------------RLLHRRQKRIIGGNNSLR----- 525
            ::.:...::.||...|.:                        |||......|..||...|     
  Fly   313 EQTAHLEDRPMLLMQCAMEENCVANEAYQIQRDDPHWRYRSRRLLKFTAAAINAGNADFRPFKEK 377

Mouse   526 GAWPWQA-----------------SLR-LRSAHG--------DGRLLCGATLLSSCWVLTAAHCF 564
            ..|.|..                 :|| ::.|.|        |...|.|.....:|         
  Fly   378 SQWEWHMCHMHFHSMEVFATFDIFNLRGIKVAQGHKASFCLEDSNCLPGVAKKYNC--------- 433

Mouse   565 KRYG------NNSRSYAVRVG----DYHTLVPEEFEQEIGVQQIVIHRNYRPDRSDYD 612
            ..||      |.|..|...:.    |...|:|..:     |.:|.|:..::....:||
  Fly   434 ANYGDQGISINCSDVYLYNLDCQWVDVTDLIPGTY-----VLKIAINPEFKVAEMNYD 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prss12NP_032965.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 25..87
KR 83..159 CDD:214527
SR 166..265 CDD:214555
SRCR 171..265 CDD:278931
SR 273..372 CDD:214555 37/99 (37%)
SRCR 278..371 CDD:278931 33/93 (35%)
SR 386..485 CDD:214555 41/113 (36%)
SRCR 396..485 CDD:278931 37/95 (39%)
Zymogen activation region 505..516 4/34 (12%)
Tryp_SPc 516..755 CDD:214473 27/138 (20%)
Tryp_SPc 517..758 CDD:238113 27/137 (20%)
Loxl2NP_523806.2 SR 61..161 CDD:214555 37/99 (37%)
SRCR 66..160 CDD:278931 33/93 (35%)
SR 193..298 CDD:214555 40/105 (38%)
SRCR 198..298 CDD:278931 38/100 (38%)
Lysyl_oxidase 303..503 CDD:279521 33/198 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.