DRSC/TRiP Functional Genomics Resources

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Protein Alignment PHC2 and C04E7.3

DIOPT Version :10

Sequence 1:NP_001372041.1 Gene:PHC2 / 1912 HGNCID:3183 Length:881 Species:Homo sapiens
Sequence 2:NP_001348643.1 Gene:C04E7.3 / 259695 WormBaseID:WBGene00015430 Length:1046 Species:Caenorhabditis elegans


Alignment Length:204 Identity:52/204 - (25%)
Similarity:74/204 - (36%) Gaps:40/204 - (19%)


- Green bases have known domain annotations that are detailed below.


Human   238 PPTPAQVQNLTLRTQQTPAAAASGPT-------PTQPVLPSLALKPTPGGSQPLPTPAQ-SRNTA 294
            ||....:.|.|.:| .||..::...|       ..||...||:...:...|:.....|. .|||.
 Worm     6 PPDIRAIPNFTAQT-DTPIMSSHDFTHPVRYTNKNQPGRNSLSRHESGDSSRSTQGHASLPRNTV 69

Human   295 ------QASPAG--AKP-----GIADSVMEPHKK-GDGNSSVPGSMEGRAGLSRTVP---AVAAH 342
                  ..||.|  ::|     |....|.|.:.. .:.|.:....||...  ...||   |.||.
 Worm    70 GPPDPNALSPEGLVSRPLNTGVGPNQQVQEQYNAFSNQNENDRKMMEDPR--ESAVPNKRAAAAP 132

Human   343 PLIAPAYAQLQPHQLLPQPSSKHLQP----QFVIQQQPQPQQQQPPPQQSRPVLQAEPHPQLASV 403
            |.|  .|.|..      |...|:..|    |..|:::|:|:....|.:.|:|...:||.....|:
 Worm   133 PWI--GYTQTY------QGQQKYRNPQKLQQSTIKKRPKPETTSGPKKASKPTSLSEPKKTECSI 189

Human   404 SPSVALQPS 412
            |....|..|
 Worm   190 SEDELLSAS 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PHC2NP_001372041.1 PHA03247 <116..571 CDD:223021 52/204 (25%)
PHC2_SAM_assoc 693..812 CDD:465202
SAM_Ph1,2,3 812..880 CDD:188976
C04E7.3NP_001348643.1 PTZ00121 <171..384 CDD:173412 8/28 (29%)
Blue background indicates that the domain is not in the aligned region.

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