DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PHC1 and pqn-26

DIOPT Version :9

Sequence 1:XP_011518905.1 Gene:PHC1 / 1911 HGNCID:3182 Length:1021 Species:Homo sapiens
Sequence 2:NP_492375.3 Gene:pqn-26 / 183974 WormBaseID:WBGene00004115 Length:664 Species:Caenorhabditis elegans


Alignment Length:796 Identity:186/796 - (23%)
Similarity:258/796 - (32%) Gaps:251/796 - (31%)


- Green bases have known domain annotations that are detailed below.


Human    97 ASRQASSPNTSTTQQQTTTTQASINLATTSAAQLISRSQSVSSPSATTLTQSVLLGNTTS-PPLN 160
            ||..|:...|:..|||....|..     ...:|....|.| |.|::.|.||.    .|.| .|..
 Worm    19 ASTLANIYGTAEIQQQQYQQQQQ-----PQYSQSYGESPS-SFPTSFTYTQP----ETQSYQPSQ 73

Human   161 QSQAQMYLRPQLGNLLQVNRTLGRNVPLASQLILMPNGAVAAVQQEVPSAQSPGVHADADQVQNL 225
            ||.|..      .||...:......:...||....||.|....     :|.|....|.....|..
 Worm    74 QSSASS------SNLQFHSYNSQPGIQYGSQDSFYPNQAALTA-----AATSFATSAAQQYAQTY 127

Human   226 AVRNQQASAQGPQMQGSTQKAIPPGASPVSSLSQASSQALAVAQASSGATNQSLNLSQAGGGSGN 290
            :.:.||...|.|..                           :.||:....:|.|::.|.  ..|.
 Worm   128 SQQQQQQQVQAPAQ---------------------------IDQANLAKYSQYLDILQK--AYGI 163

Human   291 SIPGSMGPGGGGQAHGGLGQLPSSGMGGGSCPRKGTGVVQPLPAAQTVTVSQGSQTEAESAAAKK 355
            .:||.|.                               :||..||   |.:.|.||..:...|.:
 Worm   164 QLPGEMS-------------------------------MQPNTAA---TNAGGYQTSQQQQVANQ 194

Human   356 A-EADGSGQQNVGMNLTRTATPAPSQTLISSATYTQIQPHSLIQQQQQIHLQ-QKQVVIQQQIAI 418
            . :..|..||           |.|:||...       .|.::.|.|.|::.| |.::..|||:|.
 Worm   195 VPQTYGQSQQ-----------PPPTQTYSG-------YPQNVAQPQPQVNTQSQAEITYQQQLAA 241

Human   419 HHQQQFQHRQSQLLHTATHLQLAQQQQQQQQQQQQQQQPQATTLTAPQPPQVPPT----QQVPPS 479
            :.|||.|..|.|.|.....|...||:|||||||..|||..|..:.|.|..|....    ||...:
 Worm   242 YQQQQQQIAQQQQLQQQQQLAAEQQKQQQQQQQIAQQQQLAEQIAAQQAQQREAARLAQQQAQQA 306

Human   480 QSQQQAQTLVVQPMLQSSPL--------SLPPDAAPKPPIPIQSKPPVAPIKPPQLGAAKMSAAQ 536
            |..||.|..:.|..||....        .:.|:...:|..|:|.:  :|  :||         .|
 Worm   307 QQAQQLQQQIRQQQLQQQQQQQQQNQYGGMQPNPYVQPQAPVQQQ--IA--QPP---------PQ 358

Human   537 QPPPHIPVQVVGTRQPGTAQAQALGLAQLAAAVPTSRGMPGTVQSGQAHLASSPPSSQAPGALQ- 600
            ||.|..|:..:...|....||                                 |:.|||..:| 
 Worm   359 QPAPQQPMNFLPAPQAPIIQA---------------------------------PAPQAPAPMQP 390

Human   601 --------ECPPTLAPGMTLAPVQGTAHVVKGGATTSSPVVAQVPAAFYMQSVHLPGKPQTLAVK 657
                    ..|||.......|.: |..:...|   .|.|.|...|..   ..|.:|  ..:.:..
 Worm   391 QQPPKQYVTQPPTYKNNYQTAAL-GQVNTYSG---QSKPQVYTYPGP---SQVQIP--THSTSYG 446

Human   658 RKADS---EEERDDVSTLGSMLPAKASPVAESPKVMDEKSSLGEKAESVANVNAN---------- 709
            ...||   ||....|.:...::|.:  ||...|.:            |||.|...          
 Worm   447 NHEDSVIEEEPHGSVISQQQVVPPR--PVQPVPPM------------SVATVTRGPPPPTRPASV 497

Human   710 -TPSSELVALT---PAPSVPPPTLAMV----SRQMGDSKPPQA---IVKP---QILTHIIEGF-- 758
             .|||.:|..:   |:|:..|||.|.:    ..:...|:|..|   :|.|   |.||..|...  
 Worm   498 IAPSSSVVPKSQPRPSPTTRPPTRATIRPTPQNKAVTSRPAPATSSVVTPSPSQSLTQQIRKLPA 562

Human   759 VIQEGAEPFPVGCSQLLKESEKPLQTGLPTGLTENQSGGPL------GVDSPSA------ELDKK 811
            |:...::          .||.|..:|     |..:..|.||      ..|.|:|      :|...
 Worm   563 VLYIDSK----------NESTKKTET-----LLRDTYGLPLVTFYVDKTDKPAAIQRQLQQLTAH 612

Human   812 ANLLKCEYCGKYAPAE 827
            ..|.....||.:..:|
 Worm   613 KGLPYLFICGTFIGSE 628

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PHC1XP_011518905.1 zf-FCS 809..844 CDD:283998 4/19 (21%)
PHC2_SAM_assoc 845..951 CDD:293222
SAM_Ph1,2,3 952..1020 CDD:188976
SAM 954..1021 CDD:197735
pqn-26NP_492375.3 Thioredoxin_like 574..643 CDD:381987 14/60 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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