DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PHC1 and Phc1

DIOPT Version :9

Sequence 1:XP_011518905.1 Gene:PHC1 / 1911 HGNCID:3182 Length:1021 Species:Homo sapiens
Sequence 2:XP_006505561.1 Gene:Phc1 / 13619 MGIID:103248 Length:1040 Species:Mus musculus


Alignment Length:1027 Identity:929/1027 - (90%)
Similarity:957/1027 - (93%) Gaps:23/1027 - (2%)


- Green bases have known domain annotations that are detailed below.


Human     1 METESEQNSNSTNGSSSSGGSSRPQIAQMSLYERQAVQALQALQRQPNAAQYFHQFMLQQQLSNA 65
            |||||||||:|||||||||.|||||||||||||||||||||||||||||||||||||||||||||
Mouse    31 METESEQNSSSTNGSSSSGASSRPQIAQMSLYERQAVQALQALQRQPNAAQYFHQFMLQQQLSNA 95

Human    66 QLHSLAAVQQVRGQQPAGPRGRGQALQATIAASRQASSPNTSTTQQQTTTTQASINLATTSAAQL 130
            |||||||||                 ||||||||||||||:||.||||.|||||:||||||||||
Mouse    96 QLHSLAAVQ-----------------QATIAASRQASSPNSSTAQQQTATTQASMNLATTSAAQL 143

Human   131 ISRSQSVSSPSATTLTQSVLLGNTTSPPLNQSQAQMYLRPQLGNLLQVNRTLGRNVPLASQLILM 195
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   144 ISRSQSVSSPSATTLTQSVLLGNTTSPPLNQSQAQMYLRPQLGNLLQVNRTLGRNVPLASQLILM 208

Human   196 PNGAVAAVQQEVPSAQSPGVHADADQVQNLAVRNQQASAQGPQMQGSTQKAIPPGASPVSSLSQA 260
            |||||||||||||.||||||||||||||||||||||||||||||.|||||||||||||||.|||.
Mouse   209 PNGAVAAVQQEVPPAQSPGVHADADQVQNLAVRNQQASAQGPQMPGSTQKAIPPGASPVSGLSQT 273

Human   261 SSQALAVAQASSGATNQSLNLSQAGGGSGNSIPGSMGPGGGGQAHGGLGQLPSSGMGGGSCPRKG 325
            ||||||||||||||:.|||||||||||||||:||||||||||||.||||||||||:.||||||||
Mouse   274 SSQALAVAQASSGASGQSLNLSQAGGGSGNSLPGSMGPGGGGQAPGGLGQLPSSGLTGGSCPRKG 338

Human   326 TGVVQPLPAAQTVTVSQGSQTEAESAAAKKAEADGSGQQNVGMNLTRTATPAPSQTLISSATYTQ 390
            |||||||||||||||||||||||||||||||||||||||:|||||||||||||||||||||||||
Mouse   339 TGVVQPLPAAQTVTVSQGSQTEAESAAAKKAEADGSGQQSVGMNLTRTATPAPSQTLISSATYTQ 403

Human   391 IQPHSLIQQQQQIHLQQKQVVIQQQIAIHHQQQFQHRQSQLLHTATHLQLA-----QQQQQQQQQ 450
            |||||||||||||||||||||||||||||||||||||||||||||||||||     |||||||||
Mouse   404 IQPHSLIQQQQQIHLQQKQVVIQQQIAIHHQQQFQHRQSQLLHTATHLQLAQQQQQQQQQQQQQQ 468

Human   451 QQQQQQPQATTLTAPQPPQVPPTQQVPPSQSQQQAQTLVVQPMLQSSPLSLPPDAAPKPPIPIQS 515
            ||||||.|.||||||||||||||||||||||||||||||||||||||||:|||:...||||||||
Mouse   469 QQQQQQQQGTTLTAPQPPQVPPTQQVPPSQSQQQAQTLVVQPMLQSSPLTLPPEPTSKPPIPIQS 533

Human   516 KPPVAPIKPPQLGAAKMSAAQQPPPHIPVQVVGTRQPGTAQAQALGLAQLAAAVPTSRGMPGTVQ 580
            |||||||||||||||||||.||||||||||||||||||:|||||||||||||||||.||:.|.||
Mouse   534 KPPVAPIKPPQLGAAKMSATQQPPPHIPVQVVGTRQPGSAQAQALGLAQLAAAVPTPRGITGAVQ 598

Human   581 SGQAHLASSPPSSQ-APGALQECPPTLAPGMTLAPVQGTAHVVKGGATTSSPVVAQVPAAFYMQS 644
            .||||||||||||| ||||||||||.||.|||||||||||||||||.|.||||||||||||||||
Mouse   599 PGQAHLASSPPSSQAAPGALQECPPALAAGMTLAPVQGTAHVVKGGPTASSPVVAQVPAAFYMQS 663

Human   645 VHLPGKPQTLAVKRKADSEEERDDVSTLGSMLPAKASPVAESPKVMDEKSSLGEKAESVANVNAN 709
            ||||||.|||||||||:|||||||:|.|.|:||.||||.||||||::||:|||||||.||::|||
Mouse   664 VHLPGKAQTLAVKRKAESEEERDDLSALASVLPTKASPAAESPKVIEEKNSLGEKAEPVASLNAN 728

Human   710 TPSSELVALTPAPSVPPPTLAMVSRQMGDSKPPQAIVKPQILTHIIEGFVIQEGAEPFPVGCSQL 774
            .|:|:||||.|.||.||||||:||||||||||||||||||||||||||||||||||||||||||.
Mouse   729 PPNSDLVALAPTPSAPPPTLALVSRQMGDSKPPQAIVKPQILTHIIEGFVIQEGAEPFPVGCSQF 793

Human   775 LKESEKPLQTGLPTGLTENQSGGPLGVDSPSAELDKKANLLKCEYCGKYAPAEQFRGSKRFCSMT 839
            |||::||||.||||||.|:|..||||.||||.||:||||||||||||||||||||||||||||||
Mouse   794 LKETKKPLQAGLPTGLNESQPSGPLGGDSPSVELEKKANLLKCEYCGKYAPAEQFRGSKRFCSMT 858

Human   840 CAKRYNVSCSHQFRLKRKKMKEFQEANYARVRRRGPRRSSSDIARAKIQGKCHRGQEDSSRGSDN 904
            ||||||||||||||||||||||||||:||||||||||||||||||||||||.|||||||||||||
Mouse   859 CAKRYNVSCSHQFRLKRKKMKEFQEASYARVRRRGPRRSSSDIARAKIQGKRHRGQEDSSRGSDN 923

Human   905 SSYDEALSPTSPGPLSVRAGHGERDLGNPNTAPPTPELHGINPVFLSSNPSRWSVEEVYEFIASL 969
            ||||||||||||||||||||||||||||..|.|.||||.||||||||||||:|||||||||||||
Mouse   924 SSYDEALSPTSPGPLSVRAGHGERDLGNTITTPSTPELQGINPVFLSSNPSQWSVEEVYEFIASL 988

Human   970 QGCQEIAEEFRSQEIDGQALLLLKEEHLMSAMNIKLGPALKICAKINVLKET 1021
            ||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   989 QGCQEIAEEFRSQEIDGQALLLLKEEHLMSAMNIKLGPALKICAKINVLKET 1040

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PHC1XP_011518905.1 zf-FCS 809..844 CDD:283998 33/34 (97%)
PHC2_SAM_assoc 845..951 CDD:293222 98/105 (93%)
SAM_Ph1,2,3 952..1020 CDD:188976 66/67 (99%)
SAM 954..1021 CDD:197735 65/66 (98%)
Phc1XP_006505561.1 PHA03247 <509..639 CDD:223021 114/129 (88%)
PHC2_SAM_assoc 864..970 CDD:374673 98/105 (93%)
SAM_Ph1,2,3 971..1039 CDD:188976 66/67 (99%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C83961980
Domainoid 1 1.000 1471 1.000 Domainoid score I687
eggNOG 00.000 Not matched by this tool.
HGNC 1 1.500 - -
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H107079
Inparanoid 1 1.050 1805 1.000 Inparanoid score I2040
Isobase 00.000 Not matched by this tool.
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG43859
OrthoDB 1 1.010 - - D120742at7742
OrthoFinder 1 1.000 - - FOG0009169
OrthoInspector 1 1.000 - - oto118208
orthoMCL 1 0.900 - - OOG6_112834
Panther 1 1.100 - - LDO PTHR12247
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4720
SonicParanoid 1 1.000 - - X8508
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1717.440

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