DRSC/TRiP Functional Genomics Resources

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Protein Alignment S1PR3 and s1pr3

DIOPT Version :9

Sequence 1:NP_001382777.1 Gene:S1PR3 / 1903 HGNCID:3167 Length:378 Species:Homo sapiens
Sequence 2:XP_002937075.1 Gene:s1pr3 / 100487153 XenbaseID:XB-GENE-989349 Length:373 Species:Xenopus tropicalis


Alignment Length:378 Identity:263/378 - (69%)
Similarity:304/378 - (80%) Gaps:9/378 - (2%)


- Green bases have known domain annotations that are detailed below.


Human     1 MATALPP--RLQPVRGNETLREHYQYVGKLAGRLKEASEGSTLTTVLFLVICSFIVLENLMVLIA 63
            ||:...|  :|:|.|.:|.:..||.|.|||..|..:..:   :|.::||:|||.|||||||||||
 Frog     1 MASGSLPSKKLEPRRCDEVINRHYNYTGKLKERELDHMD---MTEIVFLIICSLIVLENLMVLIA 62

Human    64 IWKNNKFHNRMYFFIGNLALCDLLAGIAYKVNILMSGKKTFSLSPTVWFLREGSMFVALGASTCS 128
            |||||:||||||||||||||||:||||||.|||.|||.||..:|.|.||:||||||:||||||.|
 Frog    63 IWKNNRFHNRMYFFIGNLALCDMLAGIAYIVNICMSGSKTMDISLTAWFVREGSMFIALGASTFS 127

Human   129 LLAIAIERHLTMIKMRPYDANKRHRVFLLIGMCWLIAFTLGALPILGWNCLHNLPDCSTILPLYS 193
            ||||||||||||||||||||||::|||||||.||||:|:|||||||||||:.:||:|||||||||
 Frog   128 LLAIAIERHLTMIKMRPYDANKKYRVFLLIGTCWLISFSLGALPILGWNCIEDLPNCSTILPLYS 192

Human   194 KKYIAFCISIFTAILVTIVILYARIYFLVKSSSRKVANHNNSERSMALLRTVVIVVSVFIACWSP 258
            |:|:.||||||.|||:.|||||||||.|||||||:|.||:||||||||||||||||.||||||||
 Frog   193 KRYVGFCISIFIAILIAIVILYARIYILVKSSSRRVTNHSNSERSMALLRTVVIVVGVFIACWSP 257

Human   259 LFILFLIDVACRVQACPILFKAQWFIVLAVLNSAMNPVIYTLASKEMRRAFFRLVCNCLVRGRGA 323
            ||||.||||||.|:.|.||:||||||.|||||||:|||||||||||||||||||||:|||:...:
 Frog   258 LFILLLIDVACEVKTCSILYKAQWFIALAVLNSALNPVIYTLASKEMRRAFFRLVCSCLVKTNNS 322

Human   324 RASPIQPALDPSRSKSSSSNNSSHSPKVKEDLPHTAPSSCIMDKNAALQNGIF 376
            |:.||||..|.||||.|||:||.....:.:...|:....    ..::..||.|
 Frog   323 RSLPIQPTPDQSRSKCSSSSNSPKHKSIIQTNGHSKDEK----SESSYHNGNF 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
S1PR3NP_001382777.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 327..358 14/30 (47%)
s1pr3XP_002937075.1 7tmA_S1PR3_Edg3 39..308 CDD:320467 220/271 (81%)
TM helix 1 40..66 CDD:320467 19/25 (76%)
TM helix 2 73..98 CDD:320467 21/24 (88%)
TM helix 3 110..140 CDD:320467 26/29 (90%)
TM helix 4 151..171 CDD:320467 15/19 (79%)
TM helix 5 191..220 CDD:320467 22/28 (79%)
TM helix 6 235..265 CDD:320467 27/29 (93%)
TM helix 7 276..301 CDD:320467 21/24 (88%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 418 1.000 Domainoid score I5489
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H3829
Inparanoid 1 1.050 520 1.000 Inparanoid score I7441
NCBI 1 1.000 - -
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D216370at32523
OrthoFinder 1 1.000 - - FOG0014141
OrthoInspector 1 1.000 - - oto154478
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X11684
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.060

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