DRSC/TRiP Functional Genomics Resources

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Protein Alignment LPAR1 and mAChR-C

DIOPT Version :9

Sequence 1:NP_001338326.1 Gene:LPAR1 / 1902 HGNCID:3166 Length:364 Species:Homo sapiens
Sequence 2:NP_572358.1 Gene:mAChR-C / 31626 FlyBaseID:FBgn0029909 Length:371 Species:Drosophila melanogaster


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LPAR1NP_001338326.1 7tmA_LPAR1_Edg2 50..322 CDD:341348
TM helix 1 52..76 CDD:341348
TM helix 2 85..106 CDD:341348
TM helix 3 122..144 CDD:341348
Lysophosphatidic acid binding. /evidence=ECO:0000305|PubMed:26091040 124..129
TM helix 4 166..182 CDD:341348
TM helix 5 203..226 CDD:341348
TM helix 6 257..279 CDD:341348
TM helix 7 290..315 CDD:341348
mAChR-CNP_572358.1 7tm_4 61..332 CDD:304433
7tm_1 67..321 CDD:278431
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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