Protein Alignment Pou6f1 and pdm2

DIOPT Version :9

• Sequence 1: XP_006520671.1
• Gene: Pou6f1 / 19009
• MGIID: 102935
• Length: 610
• Species: Mus musculus
• Sequence 2: NP_001285877.1
• Gene: pdm2 / 34673
• FlyBaseID: FBgn0004394
• Length: 893
• Species: Drosophila melanogaster
• Alignment Length: 547
• Identity: 144/547 - (26%)
• Similarity: 212/547 - (38%)
• Gaps: 144/547 - (26%)

Mouse   141 TVTQPLLIPIGIT------GQVAGQQGLAVWTI----PTATVAALPGLTAASPTGGTFKPPLAGL 195
            |:.:|.::|..:.      |.|....|.|...:    |.|....||  |...|..|...||
  Fly   352 TLRKPHVVPSELEHNHHWHGVVCDANGHATRLLHIAPPRAGPTPLP--THQQPPVGEVLPP---- 410

Mouse   196 QAAAVLNTALPTPVQAAPPIQASSPAQPRP------------------PAQPQPL---------F 233
                 .:|:..|.|.  ||.:.|...||.|                  |..|.||         |
  Fly   411 -----NSTSFSTIVD--PPKEPSIYEQPAPNGRHCRPANKVMRHMSNSPTPPSPLRSLSDCGKSF 468

Mouse   234 QTQPLLQTTPAILPQPTAA---------------TVAAPTP----------KTVDATPQITVQPA 273
            :.:.|.......:||..::               ...||.|          |.....|     |.
  Fly   469 EEEELELGENCEMPQNLSSKRQARELDSELENEVLDLAPPPKRLAEEQEEEKVASVNP-----PQ 528

Mouse   274 GFAFSPGIISAA---SLGGQTQILGSLTTAPVITNTIPSMPGISSQILTN------AQGQVIGAL 329
            ..||:|..:..|   .|....:::..|  ||   ...|: |.:::|.|..      ||.|.:..:
  Fly   529 PVAFAPEEMHQALQLQLHSYIEMVRQL--AP---EAFPN-PNLATQFLLQNSLQALAQFQALQQM 587

Mouse   330 PWVVNSASVATPAPAQSLQVQAVTPQLLLNAQGQVIATLASSPLPQPVAVRKPNTPESPAKSEVQ 394
                .......|.|:.|      ||             ||.|||      |.|:....|..|:.|
  Fly   588 ----KQQQREDPLPSYS------TP-------------LAKSPL------RSPSLSPVPRHSKSQ 623

Mouse   395 PIQP-----TQAVPQPAVILTSPTPAL--KPSAATPIPITCSETPTVSQLVSKPHTPSLDEDGIN 452
            ...|     ..::...:.::|..||::  :|......|...|.....|.:.....:|   |:..:
  Fly   624 QRTPPNSMTANSLGMSSAVMTPNTPSMQQQPQLQQSTPKPTSGLTVASAMAKLEQSP---EETTD 685

Mouse   453 LEEIREFAKNFKIRRLSLGLTQTQVGQALTATEGPAYSQSAICRFEKLDITPKSAQKLKPVLEKW 517
            |||:.:|||.||.||:.||.||..||.|:....|..:||:.|.|||.|:::.|:..||||:|:||
  Fly   686 LEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLQKW 750

Mouse   518 LMEAE---LRNQEGQQNLMEFVGGEPS-------KKRKRRTSFTPQAIEALNAYFEKNPLPTGQE 572
            |.:|:   .::..|..|:........|       ::||:|||........|...|..|..||.:|
  Fly   751 LEDADSTVAKSGGGVFNINTMTSTLSSTPESILGRRRKKRTSIETTVRTTLEKAFLMNCKPTSEE 815

Mouse   573 ITEIAKELNYDREVVRVWFCNRRQTLK 599
            |:::::.||.|:||:|||||||||..|
  Fly   816 ISQLSERLNMDKEVIRVWFCNRRQKEK 842

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pou6f1	XP_006520671.1	PHA03247	<48..425	CDD:223021	74/361 (20%)
		Pou	448..522	CDD:389985	35/73 (48%)
		Homeobox	546..600	CDD:365835	25/54 (46%)
pdm2	NP_001285877.1	POU	691..755	CDD:197673	31/63 (49%)
		Homeobox	789..842	CDD:278475	24/52 (46%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3802
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.810