DRSC/TRiP Functional Genomics Resources

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Protein Alignment ABCA1 and osy

DIOPT Version :10

Sequence 1:NP_005493.2 Gene:ABCA1 / 19 HGNCID:29 Length:2261 Species:Homo sapiens
Sequence 2:NP_001034071.1 Gene:osy / 43186 FlyBaseID:FBgn0053970 Length:777 Species:Drosophila melanogaster


Alignment Length:337 Identity:84/337 - (24%)
Similarity:152/337 - (45%) Gaps:73/337 - (21%)


- Green bases have known domain annotations that are detailed below.


Human  1914 IKELTKIYRRKRKPAV--DRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTTVTRGDAFL---- 1972
            ::...|:|...:.|.|  |.:.:.:|.|..:||||.:|.||::....:.|...:..|:.::    
  Fly    50 VRRAHKMYGSSKNPNVVLDGLNMTVPKGSIYGLLGASGCGKTTLLSCIVGRRRLNSGEIWVLGGR 114

Human  1973 --NKNSILSNIHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIRKLGLV 2035
              ::.|.:..     ..:||.||..|:....|.||.:.:|.::..:.:.::....|:.::.|.|.
  Fly   115 PGSRGSGVPG-----PRIGYMPQEIALYGEFTMRETLIYFGIISAMSKGDIEDRTEFLLKLLNLP 174

Human  2036 KYGEKYAGNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVVKEGR-SVVL 2099
            . ..|:..|.|||.:|::|.|:||:..|.::.|||||.|:||..|:.:|:..:.:.|.|. :|::
  Fly   175 N-ASKFVKNLSGGQQRRVSLAVALLHEPELLILDEPTVGVDPVLRQSIWDHLVDITKNGHTTVII 238

Human  2100 TSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGSNPDLKPVQDFFGLAFP 2164
            |:|.::||                   :..|:                           .||...
  Fly   239 TTHYIDEC-------------------AQAHM---------------------------IGLLRG 257

Human  2165 GSVLKEKHRNMLQYQLPSSLSSLARIF---SILSQSKKRLHIEDYSVSQTTLDQVFV----NFAK 2222
            |.:|.|:..:.|:.|.  :..||..:|   |:|....||   ...|::|..::||.|    |.|.
  Fly   258 GKMLAEESPDYLRQQY--NADSLEDVFLKLSVLQNMGKR---RRSSIAQEIVEQVTVPAISNPAL 317

Human  2223 DQSDDDHLKDLS 2234
            |.||:.|..::|
  Fly   318 DMSDEQHAAEIS 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ABCA1NP_005493.2 rim_protein 6..2236 CDD:130324 84/337 (25%)
Annulus domain 1. /evidence=ECO:0000305|PubMed:35974019 69..80
Annulus domain 2. /evidence=ECO:0000305|PubMed:35974019 368..379
Gateway domain. /evidence=ECO:0000305|PubMed:35974019 564..594
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1283..1312
osyNP_001034071.1 CcmA 50..285 CDD:440746 68/288 (24%)
YadH 578..773 CDD:440604
Blue background indicates that the domain is not in the aligned region.

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