Protein Alignment Pou3f4 and nub

DIOPT Version :9

• Sequence 1: NP_032927.1
• Gene: Pou3f4 / 18994
• MGIID: 101894
• Length: 361
• Species: Mus musculus
• Sequence 2: NP_001097153.1
• Gene: nub / 34669
• FlyBaseID: FBgn0085424
• Length: 961
• Species: Drosophila melanogaster
• Alignment Length: 368
• Identity: 146/368 - (39%)
• Similarity: 180/368 - (48%)
• Gaps: 85/368 - (23%)

Mouse    13 SSSSLVHADSAGMQQGSPFRNPQ----KLLQSDYLQGVPSNGHPLGHHWVTSLSDGGPWSSTLAT 73
            |...|:.:.|.|:.|..|....|    :.|....||.:......|
  Fly   625 SYMELLRSGSLGLAQDDPALTAQVAAAQFLMQSQLQALSQASQQL-------------------- 669

Mouse    74 SPLDQQDVKPGREDLQLGAIIHHR------------------------SPHVAHHSPHTNHPNAW 114
            ..|.:|..:...|.|||    :|:                        ||...||  |.:|| ..
  Fly   670 QALQKQQQRQVDEPLQL----NHKMTQQPRSSTPHSIRSPIAIRSPASSPQQLHH--HHHHP-LQ 727

Mouse   115 GASPAPNSSITSSGQPLNVYSQPGFTVSG-MLEHGGLTPPPAAASTQSLHPVLREPPDHGELGSH 178
            ...|:..:|:..||.     ..|....|| .:..|..||.|...::.:......||
  Fly   728 ITPPSSAASLKLSGM-----LTPSTPTSGTQMSQGTTTPQPKTVASAAAARAAGEP--------- 778

Mouse   179 HCQDHSDEETPTSDELEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFK 243
                 |.|||...:|||||||.||||||||||||.|||||:|.||||.||||||.|||||.||||
  Fly   779 -----SPEETTDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFK 838

Mouse   244 NMCKLKPLLNKWLEEAD---SSTG---SPTSIDKIAAQ----GRKRKKRTSIEVSVKGVLETHFL 298
            |||||||||.|||::||   .:||   .|.::....:.    ||:||||||||.:::|.||..||
  Fly   839 NMCKLKPLLQKWLDDADRTIQATGGVFDPAALQATVSTPEIIGRRRKKRTSIETTIRGALEKAFL 903

Mouse   299 KCPKPAAQEISSLADSLQLEKEVVRVWFCNRRQKEKRMTPPGD 341
            ...||.::||:.|||.|.:||||||||||||||||||:.|..|
  Fly   904 ANQKPTSEEITQLADRLSMEKEVVRVWFCNRRQKEKRINPSLD 946

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pou3f4	NP_032927.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	99..131		10/31 (32%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	144..192		10/47 (21%)
		POU	186..260	CDD:197673	59/73 (81%)
		Homeobox	281..335	CDD:395001	35/53 (66%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	334..361		4/8 (50%)
nub	NP_001097153.1	DUF4472	315..>399	CDD:291409
		POU	791..855	CDD:197673	53/63 (84%)
		Homeobox	886..939	CDD:278475	34/52 (65%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3802
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.810