DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pou3f2 and nub

DIOPT Version :10

Sequence 1:NP_032925.1 Gene:Pou3f2 / 18992 MGIID:101895 Length:445 Species:Mus musculus
Sequence 2:NP_001097153.1 Gene:nub / 34669 FlyBaseID:FBgn0085424 Length:961 Species:Drosophila melanogaster


Alignment Length:417 Identity:159/417 - (38%)
Similarity:190/417 - (45%) Gaps:127/417 - (30%)


- Green bases have known domain annotations that are detailed below.


Mouse    86 GGGDGSPWSTSPLGQPDI---------KPSVVVQQGGRGDELHGPGAL----------------- 124
            |.|..:|..|..|...|.         :...:.||.....||...|:|                 
  Fly   588 GLGMNNPLLTGSLSPQDFAQFHQLLQQRQVALTQQFNSYMELLRSGSLGLAQDDPALTAQVAAAQ 652

Mouse   125 -QQQHQQQQQQQQQQQQQQQQQQQQQQQRPPHLVHHAANHHP---------GPGAWRSAAAAAHL 179
             ..|.|.|...|..||.|..|:|||:|...|..::|.....|         .|.|.||.|::   
  Fly   653 FLMQSQLQALSQASQQLQALQKQQQRQVDEPLQLNHKMTQQPRSSTPHSIRSPIAIRSPASS--- 714

Mouse   180 PPSMGASNGGLLYSQPSFTVNGMLGAGGQPAGLHHHGLRDAHDEPHHADHHPHPHSHPHQ-QPP- 242
                                         |..||||                  |.||.| .|| 
  Fly   715 -----------------------------PQQLHHH------------------HHHPLQITPPS 732

Mouse   243 ------------PPPPPQGPPGHPG----------------AHHDPHSDEDTPTSDDLEQFAKQF 279
                        |..|..|.....|                |..:| |.|:|...::||||||.|
  Fly   733 SAASLKLSGMLTPSTPTSGTQMSQGTTTPQPKTVASAAAARAAGEP-SPEETTDLEELEQFAKTF 796

Mouse   280 KQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSSGSP 344
            |||||||||||.|||||:|.||||.||||||.|||||.|||||||||||||.|||::||.:..:.
  Fly   797 KQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLQKWLDDADRTIQAT 861

Mouse   345 TSI-DKIAAQ---------GRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADSLQLEKEV 399
            ..: |..|.|         ||:||||||||.:::||||..||...||:::|||.|||.|.:||||
  Fly   862 GGVFDPAALQATVSTPEIIGRRRKKRTSIETTIRGALEKAFLANQKPTSEEITQLADRLSMEKEV 926

Mouse   400 VRVWFCNRRQKEKRMTPPGGTLPGAED 426
            ||||||||||||||:.|...:..||:|
  Fly   927 VRVWFCNRRQKEKRINPSLDSPTGADD 953

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pou3f2NP_032925.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 64..173 30/122 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 203..269 20/95 (21%)
POU 264..338 CDD:197673 57/73 (78%)
Homeodomain 357..413 CDD:459649 39/55 (71%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 411..445 7/16 (44%)
nubNP_001097153.1 POU 791..855 CDD:197673 53/63 (84%)
Homeodomain 884..940 CDD:459649 39/55 (71%)

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