Protein Alignment Pou2f2 and pdm2

DIOPT Version :9

• Sequence 1: XP_006539710.1
• Gene: Pou2f2 / 18987
• MGIID: 101897
• Length: 717
• Species: Mus musculus
• Sequence 2: NP_001285877.1
• Gene: pdm2 / 34673
• FlyBaseID: FBgn0004394
• Length: 893
• Species: Drosophila melanogaster
• Alignment Length: 544
• Identity: 209/544 - (38%)
• Similarity: 261/544 - (47%)
• Gaps: 129/544 - (23%)

Mouse    27 LDSPSEHTDTERNGPDINHQNPQNKA-SPFSVSPTGPSTKVGILSGLHLTF------WGPGPC-- 82
            :|.|.|.:..|:..|:..|..|.||. ...|.|||.|| .:..||....:|      .|.. |
  Fly   419 VDPPKEPSIYEQPAPNGRHCRPANKVMRHMSNSPTPPS-PLRSLSDCGKSFEEEELELGEN-CEM 481

Mouse    83 -----------------------LSPPQIKAEDPSGDSAPAAPPPPQP---AQPHLPQAQLMLTG 121
                                   |:||..:..:...:...|:..||||   |...:.||..:...
  Fly   482 PQNLSSKRQARELDSELENEVLDLAPPPKRLAEEQEEEKVASVNPPQPVAFAPEEMHQALQLQLH 546

Mouse   122 SQLAGLSALIP--------AQQQLLLQQAQAQLLAAAVQQSSAAAANAAAAAAAASTSSSTSSAS 178
            |.:..:..|.|        |.|.||....||.....|:||..           .........|.|
  Fly   547 SYIEMVRQLAPEAFPNPNLATQFLLQNSLQALAQFQALQQMK-----------QQQREDPLPSYS 600

Mouse   179 SSTSQTPASSGGGDLPPSQPTSQPPGTPQLTLSQPIQLTAQDIQQLLQLQQLVLVPGHHLQPPAQ 243
            :..:::|..|     |...|..:...:.|.|  .|..:||..    |.:...|:.|.
  Fly   601 TPLAKSPLRS-----PSLSPVPRHSKSQQRT--PPNSMTANS----LGMSSAVMTPN-------- 646

Mouse   244 FLLPQAQQSQPGLLPTPNLFQLPQQTQGALLTSQPRAGLP-TQAMTRPTLPDPHLSHPQPPKCLE 307
                           ||::.|.||..|.   |.:|.:||. ..||.:                ||
  Fly   647 ---------------TPSMQQQPQLQQS---TPKPTSGLTVASAMAK----------------LE 677

Mouse   308 PPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNM 372
              ..|||.:|||||||||:||||||||||||||||||||||||||||||||||||||||||||||
  Fly   678 --QSPEETTDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNM 740

Mouse   373 CKLKPLLEKWLNDAETMSVDS--SLPSPNQLSSP-SLGFDGLPGRRRKKRTSIETNVRFALEKSF 434
            |||||||:|||.||::....|  .:.:.|.::|. |...:.:.||||||||||||.||..|||:|
  Fly   741 CKLKPLLQKWLEDADSTVAKSGGGVFNINTMTSTLSSTPESILGRRRKKRTSIETTVRTTLEKAF 805

Mouse   435 LANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRINPCSAAPMLPSP-GKPTS-----YSP 493
            |.|.|||||||..::|:|:|:||||||||||||||||||||   :..|.|| |.|.|     |.|
  Fly   806 LMNCKPTSEEISQLSERLNMDKEVIRVWFCNRRQKEKRINP---SLDLDSPTGTPLSSHAFGYPP 867

Mouse   494 HLVT-----PQGGAGTLPLSQASS 512
            ..:.     .:||:|:...|..||
  Fly   868 QALNMSHMQMEGGSGSFCGSSISS 891

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pou2f2	XP_006539710.1	PRK10263	<206..>334	CDD:236669	40/128 (31%)
		POU	313..387	CDD:197673	68/73 (93%)
		Homeobox	418..472	CDD:365835	40/53 (75%)
pdm2	NP_001285877.1	POU	691..755	CDD:197673	60/63 (95%)
		Homeobox	789..842	CDD:278475	39/52 (75%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	142	1.000	Domainoid score	I4663
eggNOG	1	0.900	-	-		E1_KOG3802
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0003004
OrthoInspector	1	1.000	-	-		mtm8890
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11636
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	5	5.000