Protein Alignment Pou2f1 and pdm2

DIOPT Version :9

• Sequence 1: NP_035267.2
• Gene: Pou2f1 / 18986
• MGIID: 101898
• Length: 793
• Species: Mus musculus
• Sequence 2: NP_001285877.1
• Gene: pdm2 / 34673
• FlyBaseID: FBgn0004394
• Length: 893
• Species: Drosophila melanogaster
• Alignment Length: 455
• Identity: 184/455 - (40%)
• Similarity: 234/455 - (51%)
• Gaps: 93/455 - (20%)

Mouse    92 NVQSKSSEESGDSQQSSQP-SSQPPSVQSAIPQTQLMLAGGQITGLTLTPAQQQLLLQQAQAQAQ 155
            |:.||......||:..::. ...||..:.|..|.:..:|       ::.|.|......:...||.
  Fly   484 NLSSKRQARELDSELENEVLDLAPPPKRLAEEQEEEKVA-------SVNPPQPVAFAPEEMHQAL 541

Mouse   156 LLAAAVQQHSASQ--QHSAAGATISASAATPMTQIPLSQPIQIAQDLQQLQQLQQQNLNLQQFVL 218
            .|    |.||..:  :..|..|..:.:.|   ||..|...:|.....|.|||::||...
  Fly   542 QL----QLHSYIEMVRQLAPEAFPNPNLA---TQFLLQNSLQALAQFQALQQMKQQQRE------ 593

Mouse   219 VHPTTNLQPAQFIISQTPQGQQGLLQAQNLLTQLPQQSQANLLQPQPSITLTS--------QPTT 275
             .|..:.        .||..:..|....  |:.:|:.|::....|..|:|..|        .|.|
  Fly   594 -DPLPSY--------STPLAKSPLRSPS--LSPVPRHSKSQQRTPPNSMTANSLGMSSAVMTPNT 647

Mouse   276 PTRTIAAASVQTLPQ-SQSTPKRID-----------TPSLEEPSDLEELEQFAKTFKQRRIKLGF 328
            |       |:|..|| .|||||...           ..|.||.:|||||||||||||||||||||
  Fly   648 P-------SMQQQPQLQQSTPKPTSGLTVASAMAKLEQSPEETTDLEELEQFAKTFKQRRIKLGF 705

Mouse   329 TQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAE-------------NL 380
            ||||||||||||||||||||||||||||||||||||||||||:|||.||:             |.
  Fly   706 TQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLQKWLEDADSTVAKSGGGVFNINT 770

Mouse   381 SSDSTASSPSALNSPGLGAEGLNRRRKKRTSIETNIRVALEKSFMENQKPTSEDITLIAEQLNME 445
            .:.:.:|:|.::         |.|||||||||||.:|..|||:|:.|.|||||:|:.::|:|||:
  Fly   771 MTSTLSSTPESI---------LGRRRKKRTSIETTVRTTLEKAFLMNCKPTSEEISQLSERLNMD 826

Mouse   446 KEVIRVWFCNRRQKEKRINP----------PSSGGTSSSPIKAIFPSPASLVATTPSLVTSSTAT 500
            ||||||||||||||||||||          |.|......|.:|:..|...:...:.|...||.::
  Fly   827 KEVIRVWFCNRRQKEKRINPSLDLDSPTGTPLSSHAFGYPPQALNMSHMQMEGGSGSFCGSSISS 891

Mouse   501  500
              Fly   892  891

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pou2f1	NP_035267.2	POU	304..378	CDD:197673	69/73 (95%)
		Homeobox	408..461	CDD:278475	37/52 (71%)
pdm2	NP_001285877.1	POU	691..755	CDD:197673	61/63 (97%)
		Homeobox	789..842	CDD:278475	37/52 (71%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	142	1.000	Domainoid score	I4663
eggNOG	1	0.900	-	-		E1_KOG3802
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	1	1.000	-	-		mtm8890
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11636
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	5	5.000