DRSC/TRiP Functional Genomics Resources

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Protein Alignment Y9C9A.13 and CG12084

DIOPT Version :9

Sequence 1:NP_001359968.1 Gene:Y9C9A.13 / 189418 WormBaseID:WBGene00021180 Length:635 Species:Caenorhabditis elegans
Sequence 2:NP_612112.1 Gene:CG12084 / 192509 FlyBaseID:FBgn0043458 Length:793 Species:Drosophila melanogaster


Alignment Length:781 Identity:140/781 - (17%)
Similarity:271/781 - (34%) Gaps:253/781 - (32%)


- Green bases have known domain annotations that are detailed below.


 Worm    15 LENFQNGTYNDFETHLDLQSSNIIFASLLSKRSSEVVKFFPKISKNFFLTKVNLKNVRLTHPMIK 79
            |||:|.     |...||                ..|::.|....:. .|..|||:|..|:...::
  Fly    61 LENYQR-----FNRPLD----------------DSVIRLFEDTHRT-SLKIVNLRNSTLSSIGLE 103

 Worm    80 LLSEHTLESLAL--------GDQAIRKDYKNDIAQVD-----EILQII-LNKK-------SANNL 123
            .|..|.|.:|:|        |...:...|.:.:..::     .:||.. .|:|       :..:|
  Fly   104 TLMRHKLFALSLWYCDMISVGSHHLLAHYGDSLRSLELGISSHLLQYAEPNEKEPVDFQLTCPHL 168

 Worm   124 RQLDISG---------------------SRRFLNGAIKKIGKLLPSLQSLI------VCDRLFSG 161
            |:|.::|                     |....|.:::.:|. ||:|.:||      :.::|.:.
  Fly   169 RRLVLNGVVMHHRLQFAHLHDLGHLDLTSCVLANFSLEALGS-LPNLHTLILFNVWPIANQLHAI 232

 Worm   162 SDFQKLCS---------------------------SFKNLKSLDISDTGV----------SSLYG 189
            ...::||:                           :.::|..||||.|.:          ::..|
  Fly   233 CCLRRLCTLDISISSSGNGHGTYDLPDQTLEMLMDNLRHLTHLDISGTNLAGNGVATKESTTTSG 297

 Worm   190 ISQ---------LTNLETLAMRNLNICEFGHIFRLS-------KLEALDLSFTKFDRIPVIMRQY 238
            :.|         ||::..||.|.....:|..::..:       .:.||:::....::..:...:|
  Fly   298 MQQSPKMEQHFALTDIPGLASRTQRPLQFLGLYHTAHWACKRHDIPALEVAGDANEQQILTAARY 362

 Worm   239 SESRGFIPN---------LKFLDCSGTDVTFSILDELLQKHEKLKKIVVAETLLENDEVDGVEIM 294
            ...|..:..         .:|.:|........::...:.:|.|.|.:.::.:......|.|.:..
  Fly   363 YHDRPVLLTRVLNDLYHLFRFENCKDIHTALDVVLSAMDRHLKFKHMQISGSATLFYIVKGRDRS 427

 Worm   295 NFATFDSN---KKTLNYMTSKKNLDSVIFLLRN-FETLFYKIQEISKIESSFSLVKEILKSIEVF 355
            .|.....|   :..||.|......|:   :||| :.||......:..:.....|:|.:|..:...
  Fly   428 KFGALLRNHIIRTLLNGMEMHITDDT---MLRNGYLTLTQFHMPVDVLFEYERLIKILLHGVSKT 489

 Worm   356 SNDSIICSIGLKCIGNILRSSKVTRNEQIY-----VVRHLLKILNRYL--KIF-PIHEFIIFKIW 412
            ..:..:..|.:..:..:  :.:|...::::     ||..:..::...|  .:| .:.|.....:|
  Fly   490 EQEGFVQRIAIYLLNTL--ACQVDGRQKLFLGELGVVSTMFTLIKDRLTRSVFDDVMEVAWSTMW 552

 Worm   413 EILSLPELIRISHLNTEALCKQIQRYSDHESSQIPFRAFMQILEFHDLENINFMKPLLDLLDFYK 477
            .:..          .|...||   |:.|...           :|:       |:|.|....|  :
  Fly   553 NVTD----------ETAINCK---RFLDGRG-----------MEY-------FLKCLHTFPD--R 584

 Worm   478 INILRN-LATIKSVANIEVFHEK----ENIDFLRKLL--------IG----NINFRVR------- 518
            ..:||| :..:.:||.::....|    |.|:...:||        :|    ::..|||       
  Fly   585 DELLRNMMGLLGNVAEVKWLRPKLMTQEFIEVFARLLDSLSDGIEVGGASASVVARVREREMASA 649

 Worm   519 NGKYIFAELAYNASTILFSITSNCSPHSYAHVESE-----KIRSELSEIISIIGIHQITANVDAV 578
            |..|:..:::|||:.:|            ||:.|:     .|::...|       |.:...|.|:
  Fly   650 NHAYLRFQVSYNAAGVL------------AHIASDGADAWTIKTPSRE-------HVLERMVAAI 695

 Worm   579 LSNNFLEKLIILTKSDESIL----------------FALLTLQIMLHQK------KENEKNVLTK 621
            ...|...:..|..:|.|.||                :||..|..:..:|      :||...:|.:
  Fly   696 QRWNIKSERNINYRSFEPILSLVRCYETPQCQHWAVWALANLTQVYPEKYCKLVEQENGIQILNE 760

 Worm   622 L 622
            |
  Fly   761 L 761

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Y9C9A.13NP_001359968.1 internalin_A 100..>340 CDD:380193 56/345 (16%)
leucine-rich repeat 123..148 CDD:275381 8/45 (18%)
leucine-rich repeat 149..173 CDD:275381 6/56 (11%)
leucine-rich repeat 174..195 CDD:275381 9/39 (23%)
CG12084NP_612112.1 leucine-rich repeat 110..135 CDD:275381 5/24 (21%)
leucine-rich repeat 136..167 CDD:275381 4/30 (13%)
leucine-rich repeat 168..189 CDD:275381 4/20 (20%)
leucine-rich repeat 190..213 CDD:275381 4/23 (17%)
ARM 535..628 CDD:237987 24/125 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3665
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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