DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AGXT and agxta

DIOPT Version :10

Sequence 1:NP_000021.1 Gene:AGXT / 189 HGNCID:341 Length:392 Species:Homo sapiens
Sequence 2:NP_001002331.1 Gene:agxta / 436603 ZFINID:ZDB-GENE-040718-16 Length:391 Species:Danio rerio


Alignment Length:388 Identity:229/388 - (59%)
Similarity:299/388 - (77%) Gaps:1/388 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     6 LLVTPPKALLKPLSIPNQLLLGPGPSNLPPRIMAAGGLQMIGSMSKDMYQIMDEIKEGIQYVFQT 70
            |.|.||:.||||..:|.:|:|||||||:|.||.|||...|:|.:..:..:||::||.||||.|||
Zfish     4 LSVLPPECLLKPFPVPQRLMLGPGPSNVPARISAAGAQPMLGHLHTETIEIMNQIKSGIQYAFQT 68

Human    71 RNPLTLVISGSGHCALEAALVNVLEPGDSFLVGANGIWGQRAVDIGERIGARVHPMTKDPGGHYT 135
            :|.:||.:||.||.|:|.|:.|.|||||..|:..|||||:||.:|.|||||:|:.:....||:.|
Zfish    69 KNRVTLAVSGPGHAAMECAIFNSLEPGDKILIAVNGIWGERASEIAERIGAKVNTVETMAGGYLT 133

Human   136 LQEVEEGLAQHKPVLLFLTHGESSTGVLQPLDGFGELCHRYKCLLLVDSVASLGGTPLYMDRQGI 200
            .:|:|:.|.:::|.:.|||||||||||:.|:||.|.||.:|.||.||||||:|||.|:.||.|||
Zfish   134 NEEIEKALNKYRPAVFFLTHGESSTGVVHPIDGIGPLCRKYSCLFLVDSVAALGGAPICMDEQGI 198

Human   201 DILYSGSQKALNAPPGTSLISFSDKAKKKMYSRKTKPFSFYLDIKWLANFWGCDDQP-RMYHHTI 264
            ||||:||||.|||||||:.||||::|..|:::|||||.|::||:.||||:|||||:| |.||||.
Zfish   199 DILYTGSQKVLNAPPGTAPISFSERACHKIFNRKTKPISYFLDLNWLANYWGCDDKPVRSYHHTG 263

Human   265 PVISLYSLRESLALIAEQGLENSWRQHREAAAYLHGRLQALGLQLFVKDPALRLPTVTTVAVPAG 329
            ||.|.|:||||||::||.||||||::|:|.|.|.|..|:.:||:|||:|...|||||||:..|.|
Zfish   264 PVSSFYALRESLAILAETGLENSWKRHKEVAEYFHKGLEQMGLKLFVQDKKARLPTVTTIVAPPG 328

Human   330 YDWRDIVSYVIDHFDIEIMGGLGPSTGKVLRIGLLGCNATRENVDRVTEALRAALQHCPKKKL 392
            ||||:|..|::..|:|||.||||||.|.|||:||:|||:.:.|||:|.|||..||:||.|.::
Zfish   329 YDWREITGYIMKTFNIEISGGLGPSAGMVLRVGLMGCNSNKANVDKVLEALADALKHCHKSRV 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AGXTNP_000021.1 AGAT_like 24..385 CDD:99744 216/361 (60%)
agxtaNP_001002331.1 AGAT_like 22..384 CDD:99744 216/361 (60%)

Return to query results.
Submit another query.