DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Plxna1 and PlexA

DIOPT Version :9

Sequence 1:NP_032907.1 Gene:Plxna1 / 18844 MGIID:107685 Length:1894 Species:Mus musculus
Sequence 2:NP_524637.2 Gene:PlexA / 43832 FlyBaseID:FBgn0025741 Length:1945 Species:Drosophila melanogaster


Alignment Length:1962 Identity:817/1962 - (41%)
Similarity:1128/1962 - (57%) Gaps:202/1962 - (10%)


- Green bases have known domain annotations that are detailed below.


Mouse    44 ASDWGLTHLVVHEQTGEVYVGAVNRIYKLSGNLTLLRAHVTGPVEDNEKCYPPPSVQSCPHGL-- 106
            |.|..|.||:|...||.|:||.|||:|:||.:|.|.....|||..|:.:|    |:..||...  
  Fly    70 AFDTKLNHLLVDTITGRVFVGGVNRLYQLSPDLELSETVKTGPQNDSVEC----SILDCPLNAVR 130

Mouse   107 GSTDNVNKLLLLDYAANRLLACGSASQGICQFLRLDDLFKLGEPHHRKEHYLSS---VREAGSMA 168
            ..|||.||:||:|.|.:||:||||..||.|....|.::..:       ||.:..   ..:|.|..
  Fly   131 SPTDNYNKVLLIDRATSRLIACGSLFQGTCTVRNLQNVSII-------EHEVPDAVVANDANSST 188

Mouse   169 GVLIA-GPPGQGQAK-LFVGTPIDGKSEY---FPTLSSRRLMANEEDADMFGFVYQDEFVSSQLK 228
            ...|| |||...... ::||......|.|   .|.::||.|    |...||      :..||.:.
  Fly   189 VAFIAPGPPQHPVTNVMYVGVTYTNNSPYRSEIPAVASRSL----EKTKMF------QIASSAVT 243

Mouse   229 IPSDTLSKFPAFDIY---YVYSFRSEQFVYYLTLQL-DTQLTSPDAAGEHFFTSKIVRLCVNDPK 289
            ..:.|.....|.:.|   |||.|.||:|.|:||.|| .:..:||..     :.:|:||:|..|..
  Fly   244 TGTRTFINSYARETYFVNYVYGFSSERFSYFLTTQLKHSHHSSPKE-----YITKLVRICQEDSN 303

Mouse   290 FYSYVEFPIGC---EQAGVEYRLVQDAYLSRPGQALAKQLGLAEDEEVLFTVFAQGQKNRVKPPK 351
            :|||.|.|:.|   .|.|.::.|||..:|.:|...||:.||::..::|||.||::|:.|  .|..
  Fly   304 YYSYTEIPVECISDAQGGTKFNLVQAGFLGKPSSDLAQSLGISIQDDVLFAVFSKGEGN--TPTN 366

Mouse   352 ESALCLFTLRAIKEKIKERIQSCYRGEGKLSLPWLLNKELGCINSPLQ-IDDDFCGQDFNQPLGG 415
            .||||:::|::|:.|..:.|:||:.|.|...|.: ::..:.|:.:.|| |.:||||.|.|.||||
  Fly   367 NSALCIYSLKSIRRKFMQNIKSCFNGSGMRGLDF-ISPSMPCVLTKLQTIGEDFCGLDVNSPLGG 430

Mouse   416 TVTIEGTP--LFVDKEDGLTAVAAYDYQGRTVVFAGTRSGRIRKILVDLANPSGRPALAYESVVA 478
            ...|...|  :|..|   ||:|||....|.||||.||..|.::|::::    |...|..|.|...
  Fly   431 ETPITSVPVAMFNTK---LTSVAATSTSGYTVVFVGTSDGFLKKVVIE----SSSIANEYASFAV 488

Mouse   479 QEGNPILRDLVLSPNRQYLYAMTEKQVTQVPVESCVQYTSCELCLGSRDPHCGWCVLHSICSRQD 543
            ..|:.|.||:.......|:|.|::.:|::|.|..|..|.:|..|||:|||:||||.|.:.||.:.
  Fly   489 DLGSEINRDMQFDNQNLYIYVMSKTKVSKVKVFDCSDYKTCGDCLGARDPYCGWCSLENKCSPRS 553

Mouse   544 AC-ERAEEPQRFAS-DLLQCVQLT-VQPRNVSVTMSQ-VPLVLQAWNVPDLSAGVNCSFEDFTET 604
            .| :.|.:|..:.| ...:|..:| |.|..:..|.:: :.|::.  ::|.|...:.|:|.  ||.
  Fly   554 NCQDDANDPLYWVSYKTGKCTTITSVVPHQLQRTTARTLELIID--HLPQLKENLICAFT--TED 614

Mouse   605 ESILEDGR-----IHCHSPSAREVAPITQGQGDQRVVKLYLKSKETGKKFASVDFVFYNCSVHQS 664
            :::..:..     ::|.:|....:..|.||: .....||.:::: .|....|.||.|::||.|.|
  Fly   615 KALFTNATKKRNGVNCTTPRTDMLPQIEQGK-HHFTAKLSVRTR-NGPDLVSTDFTFFDCSTHSS 677

Mouse   665 CLACVNGSFPCHWCKYRHVCTNNAAD-C--------------AFLEG-----RVNMSEDCPQIL- 708
            |..||:..|||.||...|.||::.|: |              ::..|     .:|.:.|..::| 
  Fly   678 CTRCVSSEFPCDWCVEAHRCTHDTAENCRNDILVTGVSRIGPSYRSGPGFCPTINATGDGSEVLV 742

Mouse   709 ---PSTHIYVPVGVVKPITLAARNLPQPQSGQRGYECLFHIPGSPARVTAL--RFNSSSLQCQNS 768
               .|..|.|.|.::....:..|           :.|.|:|.|   |||:|  :....::.|.:.
  Fly   743 AGGTSKSIKVKVHIIGQFIVQTR-----------FVCQFNIEG---RVTSLNAQLLGDTIYCDSM 793

Mouse   769 SYSYEGNDVSDLPVNLSVVWNGNFVIDNPQNIQAHLYKCPALRQSCGLCLKADPRFECGWCVAER 833
            .:.|.... .:|....:|:|.|:..:|||.||...:|:|..:..|||:||....::.||||.:..
  Fly   794 EFQYTSRS-PNLTATFAVIWGGSKPLDNPHNIHVVIYRCREMADSCGICLALSEKYNCGWCSSTN 857

Mouse   834 RCSLRHHC--PADSPASWMHAHHGSSRCTDPKILKLSPETGPRQGGTRLTITGENLGLRFEDVRL 896
            .|.:...|  ..:....|::.   |..|.:|:|....|:|||.:|||.:||.|.|||..:.|:..
  Fly   858 TCEVEEQCNKNKEGKTDWLNR---SEICPNPEIHTFQPKTGPWEGGTNITIRGINLGKNYNDIYS 919

Mouse   897 GVHVGKVLCSPVESEYISAEQIVCEIGDASTLRAHDALVEVCVRDCSLHYRALSPKRFTFVTPTF 961
            ||.:..:.|.|....||..:||||.:.........:..:.|.:.|    ||..|.:.:.||.|..
  Fly   920 GVRIAGINCMPFPQFYIDTKQIVCTVDSPGEQMYRNGKIVVQIGD----YRGESKEDYEFVDPKI 980

Mouse   962 YRVSPSRGPLSGGTWIGIEGSHLNAGSDVAVSIGGR-PCSFSWRNSREIRCLT--PPGHTPGSAP 1023
            ...:|..||.||||.|.|.|.||||||.:..||... ||.....:|.:..|.|  .||...|.  
  Fly   981 LDFNPKFGPTSGGTEIHITGKHLNAGSRIQASINDHLPCKILSTDSSQAICRTSASPGIIEGR-- 1043

Mouse  1024 IVININRAQLSNPEVKYNYTEDPTILRID---------PEWSINSGGTLLTVTGTNLATVREPRI 1079
            :.::.:.......:..:.|..|||:..:.         |: .|.:||..::||||...:::.|.|
  Fly  1044 LKMSFDNGPREFNDYNFKYVLDPTVEHVSSGPSGQIKVPK-GIPAGGIRISVTGTQFTSIQNPNI 1107

Mouse  1080 RAKYGGIERENSCMVYNDTTMVCRAPSIDNPKRSPPELGERPD--EIGFIMDN---VRTLLVLNS 1139
            ...|.|....:.|.|.:||.|.|.:|.:|  ..|.....|||.  |.||:|||   |:.|..:::
  Fly  1108 YVVYNGEMYASPCRVQSDTEMECASPVVD--VDSHVIEAERPILLEYGFLMDNVLRVQNLSKVHN 1170

Mouse  1140 SSFLYYPDP---VLEPLSPTGLLELKPSSPLILKGRNLLPPAPGNSRLNYTVLIGSTPC-ILTVS 1200
            :.|..||:|   :.|.     .::...|..|.:.||||   .......:..|.||:..| |.::|
  Fly  1171 NHFELYPNPEYFIFEE-----RVKYFKSEYLTINGRNL---DRACKESDVEVKIGNGFCNITSLS 1227

Mouse  1201 ETQLLCEAP-------NLTGQHKVTVRAG-GFEFSPGMLQVYSDSLL----------TLPAIVGI 1247
            ..||.|..|       ::.|. :|.||.| ..|:..|:|...|.:::          .:..||  
  Fly  1228 RQQLTCRPPSEATATKSMNGP-EVIVRIGTSLEYRIGILSYESSNIILDWGENVIFAVIATIV-- 1289

Mouse  1248 GGGGGLLLLVIVAVLIAYKRKSRDADRTLKRLQLQMDNLESRVALECKEAFAELQTDIHELTSDL 1312
                 :|||:.||:|:|||:||.::.|.|:.:|.|||.||.|||.|||||||||||::.:||.||
  Fly  1290 -----ILLLIFVALLVAYKKKSSESSRVLRNMQEQMDILELRVAAECKEAFAELQTEMTDLTGDL 1349

Mouse  1313 DGAGIPFLDYRTYAMRVLFPGIEDHPVLK-EMEVQANVEKSLTLFGQLLTKKHFLLTFIRTLEAQ 1376
            ...||||||||:|||::|||..|||.||: |.......||.|.:||||:..|.|||.||||||:.
  Fly  1350 TSGGIPFLDYRSYAMKILFPNHEDHIVLQWERPELLRKEKGLRIFGQLIMNKTFLLLFIRTLESN 1414

Mouse  1377 RSFSMRDRGNVASLIMTALQGEMEYATGVLKQLLSDLIEKNLESKNHPKLLLRRTESVAEKMLTN 1441
            |.||||:|.|||||||..||.::||.|.:||.||.|||||.:|.|:|||||||||||||||||:.
  Fly  1415 RYFSMRERVNVASLIMVTLQSKLEYCTDILKTLLGDLIEKCIEGKSHPKLLLRRTESVAEKMLSA 1479

Mouse  1442 WFTFLLYKFLKECAGEPLFMLYCAIKQQMEKGPIDAITGEARYSLSEDKLIRQQIDYKTLT---- 1502
            ||||||||||||||||||:||:.|:|.|::|||:||.|.||||||||:|||||.||::.:.    
  Fly  1480 WFTFLLYKFLKECAGEPLYMLFRAVKGQVDKGPVDACTHEARYSLSEEKLIRQSIDFRPMNVYAS 1544

Mouse  1503 -----LNCVN----PEH-ENAPEVPVKGLNCDTVTQVKEKLLDAVYKGVPYSQRPKAGDMDLEWR 1557
                 :.|.|    |.| ||   |.||.|:|||:.|||||.|:.:|:.:|.||||:..|:|||||
  Fly  1545 IIQQPIFCNNLDMLPSHTEN---VSVKVLDCDTIGQVKEKCLETIYRNIPSSQRPRKDDLDLEWR 1606

Mouse  1558 QGRMARIILQDEDVTTKIDNDWKRLNTLAHYQVTDGSSVALVPKQTSAYNISNSSTFTKSLSRYE 1622
            .|...|:||.|||||:|.:::||:||||.||.|.||:.::|||||:|.||.|..|...:...:||
  Fly  1607 TGATGRVILYDEDVTSKTESEWKKLNTLQHYNVPDGAGLSLVPKQSSIYNFSILSDKNEKSHKYE 1671

Mouse  1623 SM---LRTASSPDSLRSRTPMITPDLESGTKLWHLVKNHDHLDQREGDRGSKMVSEIYLTRLLAT 1684
            ::   ..|:|||...|:.:|:.....|:|.:.|||||:||...|:||:|.:|:||||||||||||
  Fly  1672 TLNISKYTSSSPTFSRAGSPLNNDMHENGLRYWHLVKHHDSDMQKEGERVNKLVSEIYLTRLLAT 1736

Mouse  1685 KGTLQKFVDDLFETIFSTAHRGSALPLAIKYMFDFLDEQADKHQIHDSDVRHTWKSNCLPLRFWV 1749
            |||||||||||||||||||||||||||||||||||||:||..|.|.|.:|.||||||.|||||||
  Fly  1737 KGTLQKFVDDLFETIFSTAHRGSALPLAIKYMFDFLDDQAQLHGITDPEVVHTWKSNSLPLRFWV 1801

Mouse  1750 NVIKNPQFVFDIHKNSITDACLSVVAQTFMDSCSTSEHKLGKDSPSNKLLYAKDIPNYKSWVERY 1814
            |:||||.|||||||::|.|:||||||||||||||||:|:|||||||:|||||||||.|:.||:||
  Fly  1802 NLIKNPNFVFDIHKSNIVDSCLSVVAQTFMDSCSTSDHRLGKDSPSSKLLYAKDIPEYRKWVDRY 1866

Mouse  1815 YADIAKMPAISDQDMSAYLAEQSRLHLSQFNSMSALHEIYSYIAKYKDEILVALEKDEQARRQRL 1879
            |.||..|..||||||:|.|||:||||.::||:..||||:|:|..||.:::.|.||:||.:::|||
  Fly  1867 YRDIRDMSPISDQDMNAMLAEESRLHTTEFNTNCALHELYTYAVKYNEQLTVTLEEDEFSQKQRL 1931

Mouse  1880 RSKLEQVVDTMA 1891
            ..|||||.:.|:
  Fly  1932 AFKLEQVHNIMS 1943

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Plxna1NP_032907.1 Sema_plexin_A1 36..511 CDD:200532 173/486 (36%)
PSI 512..>554 CDD:279745 19/42 (45%)
PSI 658..705 CDD:279745 20/66 (30%)
PSI 809..860 CDD:279745 13/52 (25%)
IPT_plexin_repeat1 862..958 CDD:238585 32/95 (34%)
IPT_plexin_repeat2 959..1044 CDD:238584 28/87 (32%)
IPT_plexin_repeat3 1046..1146 CDD:238586 35/113 (31%)
TIG 1148..1232 CDD:280079 25/95 (26%)
Plexin_cytopl 1316..1864 CDD:285529 359/565 (64%)
PlexANP_524637.2 Sema_plexin_like 75..520 CDD:200497 171/480 (36%)
PSI 522..574 CDD:279745 20/51 (39%)
PSI 671..>699 CDD:279745 14/27 (52%)
PSI 830..883 CDD:279745 14/55 (25%)
IPT_plexin_repeat1 885..977 CDD:238585 32/95 (34%)
IPT_plexin_repeat2 978..1063 CDD:238584 27/86 (31%)
IPT 1078..1177 CDD:301692 33/101 (33%)
IPT_PCSR 1196..>1255 CDD:238337 19/62 (31%)
Plexin_cytopl 1353..1916 CDD:285529 359/565 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167837186
Domainoid 1 1.000 710 1.000 Domainoid score I119
eggNOG 1 0.900 - - E1_KOG3610
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 1362 1.000 Inparanoid score I132
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D56043at33208
OrthoFinder 1 1.000 - - FOG0000391
OrthoInspector 1 1.000 - - otm43935
orthoMCL 1 0.900 - - OOG6_100269
Panther 1 1.100 - - O PTHR22625
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X591
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.760

Return to query results.
Submit another query.