DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pld1 and Pld

DIOPT Version :9

Sequence 1:NP_001355596.1 Gene:Pld1 / 18805 MGIID:109585 Length:1074 Species:Mus musculus
Sequence 2:NP_001137610.1 Gene:Pld / 35554 FlyBaseID:FBgn0286511 Length:1364 Species:Drosophila melanogaster


Alignment Length:1230 Identity:456/1230 - (37%)
Similarity:645/1230 - (52%) Gaps:202/1230 - (16%)


- Green bases have known domain annotations that are detailed below.


Mouse    13 TLQKIAADMSNLIENLDTRELHFEGEEVEYDASPGDPKAQEGCIPFSSIYN-TQGFKEPNIQTYL 76
            |:.....|...|:|..:|     :.:|.|:|....:.......|||:|||. :..|.....:.::
  Fly   169 TILSNVGDKPVLVERKET-----DDDEEEFDDEENNSVVLRHEIPFTSIYGPSVKFNSFQRKVFI 228

Mouse    77 SGCPIKAQVLEVERFTSTSRVPSINLYTIELTHGEFTWQVKRKFKHFQEFHRELLKYKAFIRIPI 141
            .|..|..::::.|| :.|:.:.:.||||||||||.|.|.:||::|||...|::|..::..:.||.
  Fly   229 PGREIHVRIVDTER-SVTTHLLNPNLYTIELTHGPFKWTIKRRYKHFNSLHQQLSFFRTSLNIPF 292

Mouse   142 PTKRHTFRRQNVKEEPREM---------------------------------------------- 160
            |::.|..:|..:|...|||                                              
  Fly   293 PSRSHKEKRTTLKATAREMADESTLKDLPSHTKVKQTSTPLRAEGRSSKIAGSNANNAMAMISPN 357

Mouse   161 -------------------------PSLPRSSENAIQEEQFFGRRKQLEDYLTKILKMPMYRNYH 200
                                     |..|...|:.:..|....|.|||||||..:|.:.:||::|
  Fly   358 HSSILAGLTPRRIQKKRKKKKKRKLPRFPNRPESLVTVENLSVRIKQLEDYLYNLLNISLYRSHH 422

Mouse   201 ATTEFLDVSQLSFIHDLGPKGLEGMIMKRSGGHRIPG-----------VNCCGHGR------ACY 248
            .|..|::||.:||:..:|.||.||:|:||:|..| ||           .|||....      .|.
  Fly   423 ETLNFVEVSNVSFVPGMGIKGKEGVILKRTGSTR-PGQAGCNFFGCFQKNCCVRCNYFCSDVVCG 486

Mouse   249 RWSKRWLIVKDSFLLYMKPDSGAIAFVLLVDKEFRVKVGRKETETKYGLRIDNLSRTLILKCNSY 313
            .|..||..||::...|::|..|:|..|:|.|:.|.|..|..:|..:.||::...:|.::|||.:.
  Fly   487 TWRNRWFFVKETCFGYIRPTDGSIRAVILFDQGFDVSTGIYQTGMRKGLQVLTNNRHIVLKCWTR 551

Mouse   314 RHARWWGGAIEEFIRKHGADFLKDHRFGSYAALHENTLAKWYVNAKGYFEDIANAMEEASEEIFI 378
            |..:.|...::.....:..||...:...|:|.:..||.|.|||:...|...:|:.:|.|.|||:|
  Fly   552 RKCKEWMQYLKNTANSYARDFTLPNPHMSFAPMRANTHATWYVDGAQYMSAVADGLEAALEEIYI 616

Mouse   379 TDWWLSPEIFLKRPVVEGNRWRLDCILKRKAQQGVRIFIMLYKEVELALGINSEYSKRTLMRLHP 443
            .||||||||::|||.::|:.||||.||.|||:||||:|::||||||:||||||.|||.||.: |.
  Fly   617 ADWWLSPEIYMKRPALDGDYWRLDKILLRKAEQGVRVFVLLYKEVEMALGINSYYSKSTLAK-HE 680

Mouse   444 NIKVMRHPDHVSSSVYLWAHHEKLVIIDQSVAFVGGIDLAYGRWDDNEHRLTDVGSVKRVTSGLS 508
            ||||||||||....:.|||||||:|:|||:.||:|||||.||||||:.|||||:||:.  ||..|
  Fly   681 NIKVMRHPDHARGGILLWAHHEKIVVIDQTYAFMGGIDLCYGRWDDHHHRLTDLGSIS--TSSFS 743

Mouse   509 LGSLTAASV----ESMESL--SLKDKHEFH-----KKEPISKIVDE--TDMKLK----------- 549
            ..:....|:    :..:|.  |.|.....|     |:.|.|...||  |.::||           
  Fly   744 GSTRRTPSLYFTKDDTDSAFGSRKSSRNAHYDTSAKERPPSPPPDEPNTSIELKTLKPGDRLLIP 808

Mouse   550 --------------GIG-KSRKFSKFSLYR---------------QLHRHHLHNADSISSIDSTS 584
                          ||. :..|.:...:.|               ::.:..:|...:..:.:.::
  Fly   809 STLVSSPGETPAESGIALEGMKLNTPEMERKNVLDRLKNNAMKGARMGKDFMHRLTATETEEKSA 873

Mouse   585 SYFSHCRSHQNLIHGLKPHLKLFHPSSESEQGLTRHSTDTGSIRSVQTGVGELHGETRFWHGKDY 649
            ..:: ..|.:...|    .:.|...|...|..:|..||..         :.|..|:.::|.||||
  Fly   874 EVYT-IESEEATDH----EVNLNMASGGQEVAITTSSTQI---------LSEFCGQAKYWFGKDY 924

Mouse   650 CNFVFKDWVQLDKPFADFIDRYSTPRMPWHDIGSVVHGKAARDVARHFIQRWNFTKIMKPKYRSL 714
            .||:.|||:.|:.||.|.|||.:||||||||:|..|.|.:|||||||||||||..|:.|.: .:.
  Fly   925 SNFILKDWMNLNSPFVDIIDRTTTPRMPWHDVGLCVVGTSARDVARHFIQRWNAMKLEKLR-DNT 988

Mouse   715 SYPFLLPKSQATAHELR----YQVPGAVPAKVQLLRSAADWSAGIKHH---EESIHAAYIHVIEN 772
            .:|:|:|||.   |::|    .|.........|||||.:.||.|....   |:|||.|||..|..
  Fly   989 RFPYLMPKSY---HQVRLNPNIQQNRQQRVTCQLLRSVSAWSCGFIEADLVEQSIHDAYIQTITK 1050

Mouse   773 SKHYIYIENQFFISC-------ADDKVVFNKVGDAIAQRILKAHREGQRYRVYIVIPLLPGFEGD 830
            ::||:||||||||:.       .....|.|::|:.:.:||::||:|.:.:|||:::|||||||||
  Fly  1051 AQHYVYIENQFFITMQLGMGVPGAYNNVRNQIGETLFKRIVRAHKERKPFRVYVIMPLLPGFEGD 1115

Mouse   831 ISTGGGNALQAIMHFNYRTMCRGESSILEQLK------PELGNKWINYISFCGLRTHAELEGNLV 889
            :....|.|::||.|:||.::.||.:|||.:|:      ||      |||||..||.|:.|....:
  Fly  1116 VGGSTGIAVRAITHWNYASISRGRTSILTRLQEAGIANPE------NYISFHSLRNHSFLNNTPI 1174

Mouse   890 TELIYVHSKLLIADDNTVIIGSANINDRSMLGKRDSEMAVIVQDTETVPSVMDGKEYQAGRFARD 954
            |||||||||||||||..||.||||||||||:||||||:|.|:.|.|.....|:||:|.:|.||..
  Fly  1175 TELIYVHSKLLIADDRVVICGSANINDRSMIGKRDSEIAAILMDEEFEDGRMNGKKYPSGVFAGR 1239

Mouse   955 LRLECFRLVLGYLSDPSE-----DLQDPVSDKFFKEIWVSTAARNATIYDKVFRCLPNDEVHNLI 1014
            ||...|:..||.|.....     |:.|||.:||:...|...:.:|..|||:||:|:|.|.|....
  Fly  1240 LRKYLFKEHLGLLESEGSSRSDLDINDPVCEKFWHGTWRRISMQNTEIYDEVFKCIPTDFVKTFA 1304

Mouse  1015 QLRDFINKPILAKEDRLRAEEELRKIRGFLVQFPLYFLSEENLLPSVGTKEAIVPMEVWT 1074
            .||.:..:|.|||.....|......|:|:||..||.||::|.|.|...:||.::|..|||
  Fly  1305 SLRKYQEEPPLAKTAPDLAANRANDIQGYLVDLPLEFLNKEVLTPPGTSKEGLIPTSVWT 1364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pld1NP_001355596.1 PLN02866 82..1059 CDD:215467 432/1143 (38%)
Catalytic 463..928 213/538 (40%)
PldNP_001137610.1 PX_PLD 230..431 CDD:132805 51/201 (25%)
PH_PLD 419..564 CDD:269956 48/145 (33%)
PLDc_vPLD1_2_yPLD_like_1 590..734 CDD:197236 94/144 (65%)
PLDc_vPLD1_2_yPLD_like_2 1032..1220 CDD:197239 98/193 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167842747
Domainoid 1 1.000 175 1.000 Domainoid score I3636
eggNOG 1 0.900 - - E1_COG1502
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 776 1.000 Inparanoid score I529
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG58673
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001475
OrthoInspector 1 1.000 - - otm43397
orthoMCL 1 0.900 - - OOG6_100567
Panther 1 1.100 - - LDO PTHR18896
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2299
SonicParanoid 1 1.000 - - X1041
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.790

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