Sequence 1: | NP_497641.2 | Gene: | cdh-1 / 187783 | WormBaseID: | WBGene00019994 | Length: | 2779 | Species: | Caenorhabditis elegans |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001285551.1 | Gene: | ds / 33245 | FlyBaseID: | FBgn0284247 | Length: | 3556 | Species: | Drosophila melanogaster |
Alignment Length: | 3422 | Identity: | 877/3422 - (25%) |
---|---|---|---|
Similarity: | 1426/3422 - (41%) | Gaps: | 763/3422 - (22%) |
- Green bases have known domain annotations that are detailed below.
Worm 28 KFTVPESAQIGTRIGWISGKREESAAPKYFVVFPDEQTSKFLKVDERSGEISTIAHLDYEKRSKF 92
Worm 93 DIVAVKVEESGETIDILVEVDDENDNAPSFADQVVKLEISEFAQLGTSFALPTVTDGDGPKFDVH 157
Worm 158 RFVILQGNVNNVFKLAS-RKVNEQLQADLVVNGQLDREFRDKYELLIEAQDGGKPAKIGQLRCSI 221
Worm 222 EIIDANDNAPVFSRSRYTASVSANISIGSHLITVQATDADIGENSRISYDIKKTSAPSNSNFAIS 286
Worm 287 -QSGVITTTASL--LPASTHDVIVVASDHGSPSLSSSAVVTITVLGSTLSSPPLDIIWLVESNSA 348
Worm 349 HLMENSTLGSIVARVSI-----AQQYRDTKLRLIGSSALCPQQTDQAHVYLLLLCGILDRETASE 408
Worm 409 HHLKFLLEKDGQIIIEHPQL-------LTIGDINDNAPQWHSSQIHIS-LNRTQGGSRTL--TAK 463
Worm 464 DPDLGQNGWIRYSVLDT-----ELVSIDKETGRIFVPNTIDCNIGSEIKFRVRAEDGGSPALSTD 523
Worm 524 LQVVADLLDTESKPPQFEKALWQVEIPEDTPIGTCLVKVVANNSQCGNSKRIRYSLQNQDEHLT- 587
Worm 588 --VDTMSGTVCIQKTFDFEKQKSYQTTVIATNANSETSTSLISIRLKDVNDNWPIFYPNEYHLTV 650
Worm 651 REGPKPEE-----PLLVVSASDMDSGTFGEVSYHIL--SESSSFSINPVTGEVFAQKP----LAR 704
Worm 705 GRFHLV-VSAKDGGGQSSENSANIHITVIDKDTKTPQFSRSKYEIRTTEDILPGIAIGSVGA--- 765
Worm 766 ----MSKVKYSIYSGDQDHNFSIDEDTGKIYVTRYLDADVHDTVLLNIQATLPSGES---NQTQV 823
Worm 824 VIFIEDHNDNPPQFSSSLVEISIREDLKLHEPFYVVQASDKDKKKNGEVRYSIISSHPGSSIEID 888
Worm 889 QFTGQLSTGSLLDYEATRNYKLRVKATDLGIPPRSSNMTLFIHVLDVNDNAPEFEKSWYTMEVLE 953
Worm 954 NSPPKTIVGKVVARDKDSLENGQIVYRI--------TNG------SEYFGIDEKLGNVYTKRSID 1004
Worm 1005 REVISHVDISIVAEDKGVPPRSSTASARISVLDVNDNPPSC-LSITPIVVPAGSPLSTAIGTIVA 1068
Worm 1069 MDPDKGLNGSVLYR-AQLQSSLFVVKSNGDVYLRRQLNASDERHQRLSVIVSDQGVPRKSVVCHV 1132
Worm 1133 PVRISKGSADI-----QIQEPFQKYIEIPKSCPTGCRLTTLNA--------TGVSSWLIQSSEIS 1184
Worm 1185 NH--FAI--REGVL---FMISHPIHRPPYSLVIVLSDKND--RQKSIQLRVLASGEAANKEE--- 1237
Worm 1238 ---TIRISDSNSIGTKIGRLG--EKSADGSFFYRFSSEESC----------PL---------ELD 1278
Worm 1279 QTGGLLYLADGLRRGDTHNFSCFFEKFNTT---DGSAEEMRVDLEISRTKSDKPRFDTGHLRVNI 1340
Worm 1341 REDTPTGSIITTVNATVSDDSAS-PISYR----FPLLIDN-------FSIDQFTGDITLIDTLHW 1393
Worm 1394 HVTPTYNLIVEAF------TSGPGTTLLVTVNVDDVNDHTPFIVS-------QPTVLLPSSYRKG 1445
Worm 1446 GMVHRVVAIDLDK--DPEIRYSLKYAGSEVAKEFFKIDEKSGEIFVVESSSALSTSFGGAGLPET 1508
Worm 1509 LTIRATDL-QDLTKFDEQKVLLKASNASRSTWHFFDEQHKDVTILSTSPQGSQILQL--KFQEG- 1569
Worm 1570 -------------------VDLQ--LIPSSPHFE---------------------LKSSKIVQKS 1592
Worm 1593 ASVATGTQRFTIVAQKDDELDYSTLKIHVEPVFTEPPKISSTSCGVVTIEENVGIEDFKRILATG 1657
Worm 1658 MTE----ESRFRFQGN--APKFSINSTTGSISVLPLDREASQEHLLIIILTDGG---SRNDSCTV 1713
Worm 1714 RVTVADQNDNKP----------------------------------------------------- 1725
Worm 1726 ---------QLD-----------------------ASTPSELEIAESS----------------- 1741
Worm 1742 --RVGDVLHRFRASDMDIGQNGKFSFEL------------LEDSSGSL----DLVPETGDL---- 1784
Worm 1785 -----------------------------VLR--------------------------------- 1787
Worm 1788 ------------RLSSLQSWKIKLRV-----VDH---GVPGL----------YVEKNLEISNRNP 1822
Worm 1823 QTE------------------------------AKAPL-------------------EFLKQTYL 1838
Worm 1839 STIDEGLPRGQFIAKLQP------ELAGLTYSIVEGNIDSAFSVDS--EGVIRTNLELDREILER 1895
Worm 1896 YSLKVIGTGSG--QQIGT-RVDVRVNNLNDNVPSFPMSKPRRVPENLRVGSYVATVGAKDVDNLA 1957
Worm 1958 PLRYFLVSDSSG--QTPTHFNIDQFTGTIHLTAPLDFEVLPEHTLTIKATDGSFDTFTNLTIFVS 2020
Worm 2021 DINDNAPTF--SKPLYQTTVSPA------TFSPGQPFAKIEAHDLDARG---ALTYSLGQGSSSI 2074
Worm 2075 FRVAPESG--ALFMKVLPPA----GERYLVTVTATDNGVPSFSTSVPVSVIIGEAEPTDKPGFEK 2133
Worm 2134 AEFRFEVMENSKIG---LQIGN---------LSGEESREFHYRIQDPEASKIFSIDKFGRLFVAG 2186
Worm 2187 PIDREQRATHEFQVEIDN----EMMTSQKVQCKCHVI--VLDENDNLPVF-TSVAYYLSLKDSMA 2244
Worm 2245 HGQKIGQIMA--SDQDSGENGRVSYRILSGNDLNIVTLNPDTGSIQLNEWNDAQLDEFPNA-TWQ 2306
Worm 2307 ILVEARDHGHPARAAVGKVQVSLKMSSWSGSAPFFVLPVYEVHVL-EDTSVGTVLQKIRASN--- 2367
Worm 2368 -RLGMRNDGLLYSL-----KEHQGKL-GIDVKTGELTLKTHLDWESEPIISMYLSVSDGNGRSAV 2425
Worm 2426 VPLKIVVEPVDEFAPVFTKSSYTLQIP--ISTPAGESVGQMQAIDEDGGVHGVVKYSISDRQSTV 2488
Worm 2489 KIEEHTGIIRLQKPL-----------VSRRNLTIEQITVVAYSSPTKQSKTTVYLEIGPFDVQPS 2542
Worm 2543 LPKLLLHSKPVQIAVASL----------ILLLFLLIVV----ICICMCKSRRKTQNEKE------ 2587
Worm 2588 ---------------------------------------KKHPDVIVTAERRPSSQKPTLQKQVY 2613
Worm 2614 SVKTG--------------EIRTLSDAQHHHHHPTHSMTSSVSTSSDALRMVRGSSRSQMDSGID 2664
Worm 2665 PDNVSINSSVTDYLVSLGV-----------------NANPIPPRIRPNTTYDSLMNEYIYARVED 2712
Worm 2713 VLPPG-------PISLTTPNQHSLLRQPLSTSSSVASRR-----PPPII---------------- 2749
Worm 2750 -----------------PSFEPLTEIFNEIVEMRKQDGRKEY 2774 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
cdh-1 | NP_497641.2 | Cadherin_repeat | 29..118 | CDD:206637 | 29/88 (33%) |
Cadherin_repeat | 129..229 | CDD:206637 | 38/100 (38%) | ||
Cadherin_repeat | 238..328 | CDD:206637 | 29/92 (32%) | ||
Cadherin_repeat | 459..532 | CDD:206637 | 26/79 (33%) | ||
Cadherin_repeat | 546..637 | CDD:206637 | 33/93 (35%) | ||
Cadherin_repeat | 645..733 | CDD:206637 | 34/99 (34%) | ||
Cadherin_repeat | 746..833 | CDD:206637 | 44/96 (46%) | ||
Cadherin_repeat | 843..938 | CDD:206637 | 36/94 (38%) | ||
Cadherin_repeat | 947..1041 | CDD:206637 | 31/107 (29%) | ||
Cadherin_repeat | 1051..1136 | CDD:206637 | 23/85 (27%) | ||
Cadherin_repeat | 1337..1426 | CDD:206637 | 30/106 (28%) | ||
Cadherin_repeat | 1445..>1515 | CDD:206637 | 18/71 (25%) | ||
Cadherin_repeat | 1638..1723 | CDD:206637 | 28/93 (30%) | ||
Cadherin_repeat | 1734..1817 | CDD:206637 | 27/213 (13%) | ||
Cadherin_repeat | 1836..1923 | CDD:206637 | 36/97 (37%) | ||
Cadherin_repeat | 1934..2025 | CDD:206637 | 28/92 (30%) | ||
Cadherin_repeat | 2034..2120 | CDD:206637 | 25/100 (25%) | ||
Cadherin_repeat | 2135..2226 | CDD:206637 | 23/108 (21%) | ||
Cadherin_repeat | 2235..2330 | CDD:206637 | 25/97 (26%) | ||
Cadherin_repeat | 2345..2437 | CDD:206637 | 28/102 (27%) | ||
Cadherin_repeat | 2446..2534 | CDD:206637 | 24/100 (24%) | ||
ds | NP_001285551.1 | CA | 111..172 | CDD:214520 | 25/63 (40%) |
Cadherin_repeat | 178..282 | CDD:206637 | 38/103 (37%) | ||
Cadherin_repeat | 291..389 | CDD:206637 | 30/97 (31%) | ||
Cadherin_repeat | 406..500 | CDD:206637 | 25/98 (26%) | ||
Cadherin_repeat | 509..607 | CDD:206637 | 29/97 (30%) | ||
Cadherin_repeat | 616..711 | CDD:206637 | 33/94 (35%) | ||
Cadherin_repeat | 719..820 | CDD:206637 | 35/100 (35%) | ||
Cadherin_repeat | 832..927 | CDD:206637 | 44/96 (46%) | ||
Cadherin_repeat | 937..1032 | CDD:206637 | 36/94 (38%) | ||
Cadherin_repeat | 1040..1149 | CDD:206637 | 31/108 (29%) | ||
Cadherin_repeat | 1158..1252 | CDD:206637 | 26/97 (27%) | ||
Cadherin_repeat | 1263..1361 | CDD:206637 | 18/98 (18%) | ||
Cadherin_repeat | 1369..1481 | CDD:206637 | 24/114 (21%) | ||
Cadherin_repeat | 1489..1598 | CDD:206637 | 30/108 (28%) | ||
Cadherin_repeat | 1614..1710 | CDD:206637 | 23/99 (23%) | ||
Cadherin_repeat | 1723..1843 | CDD:206637 | 25/126 (20%) | ||
Cadherin_repeat | 1853..1948 | CDD:206637 | 28/94 (30%) | ||
Cadherin_repeat | 1957..2053 | CDD:206637 | 4/95 (4%) | ||
Cadherin_repeat | 2061..2154 | CDD:206637 | 15/92 (16%) | ||
Cadherin_repeat | 2170..2318 | CDD:206637 | 15/147 (10%) | ||
Cadherin_repeat | 2326..2424 | CDD:206637 | 36/97 (37%) | ||
Cadherin_repeat | 2434..2528 | CDD:206637 | 28/93 (30%) | ||
Cadherin_repeat | 2549..2641 | CDD:206637 | 23/94 (24%) | ||
Cadherin_repeat | 2652..2748 | CDD:206637 | 23/108 (21%) | ||
Cadherin_repeat | 2758..2858 | CDD:206637 | 26/104 (25%) | ||
Cadherin_repeat | 2866..2960 | CDD:206637 | 27/98 (28%) | ||
Cadherin_repeat | 2985..3071 | CDD:206637 | 23/95 (24%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 66 | 1.000 | Domainoid score | I6601 |
eggNOG | 1 | 0.900 | - | - | E33208_3B9B2 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H2771 | |
Inparanoid | 1 | 1.050 | 703 | 1.000 | Inparanoid score | I341 |
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S7324 |
OMA | 1 | 1.010 | - | - | QHG49414 | |
OrthoDB | 1 | 1.010 | - | - | D23733at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001195 | |
OrthoInspector | 1 | 1.000 | - | - | oto20079 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_100175 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3992 |
SonicParanoid | 1 | 1.000 | - | - | X2813 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
16 | 15.720 |