DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment R09D1.14 and Cht10

DIOPT Version :9

Sequence 1:NP_496028.1 Gene:R09D1.14 / 187741 WormBaseID:WBGene00011170 Length:150 Species:Caenorhabditis elegans
Sequence 2:NP_001036422.1 Gene:Cht10 / 3355116 FlyBaseID:FBgn0250907 Length:2286 Species:Drosophila melanogaster


Alignment Length:148 Identity:41/148 - (27%)
Similarity:70/148 - (47%) Gaps:32/148 - (21%)


- Green bases have known domain annotations that are detailed below.


 Worm    21 PTVTSISSTVAASTYPATPGCNKRIIGY------YFATQTSVITSDQVSNL-THAVFAFVNI--- 75
            |..||:      .|.|.....:.:::.|      |.::|...:..|..:|| ||.::.|..:   
  Fly  1892 PNPTSV------ITEPPIINNSYKVVCYFTSWAWYRSSQGKFVPEDIDANLCTHLIYGFAVLDSK 1950

 Worm    76 -----TSDGQLQIDGDLAKNRFTNLIEIAKQQTPQVKVMISIGG-NDN--SNNFKPVLSSPDRKK 132
                 |.|....||     |||...:...||:  .::||::||| ||:  |...:.||:|..|::
  Fly  1951 SLTIKTHDSWTDID-----NRFYERVVEYKQR--GLRVMLAIGGWNDSLGSKYARLVLNSQSRRR 2008

 Worm   133 LFINSTVSFLQTYDIDGV 150
             |:.|.:|||:.:..:|:
  Fly  2009 -FVASVISFLEQHGFEGL 2025

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
R09D1.14NP_496028.1 Glyco_18 44..>150 CDD:214753 35/123 (28%)
Cht10NP_001036422.1 Glyco_18 220..565 CDD:214753
GH18_chitolectin_chitotriosidase 221..586 CDD:119351
ChtBD2 697..737 CDD:214696
CBM_14 801..848 CDD:279884
CBM_14 875..918 CDD:279884
Glyco_18 966..1310 CDD:214753
GH18_chitolectin_chitotriosidase 967..1331 CDD:119351
Glyco_18 1410..1753 CDD:214753
GH18_chitolectin_chitotriosidase 1411..1774 CDD:119351
ChtBD2 1834..1871 CDD:214696
Glyco_18 1909..2253 CDD:214753 36/125 (29%)
GH18_chitolectin_chitotriosidase 1910..2274 CDD:119351 36/124 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160164215
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

Return to query results.
Submit another query.