DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pitx3 and ey

DIOPT Version :9

Sequence 1:XP_006526827.1 Gene:Pitx3 / 18742 MGIID:1100498 Length:388 Species:Mus musculus
Sequence 2:NP_001014693.1 Gene:ey / 43812 FlyBaseID:FBgn0005558 Length:898 Species:Drosophila melanogaster


Alignment Length:428 Identity:99/428 - (23%)
Similarity:141/428 - (32%) Gaps:179/428 - (41%)


- Green bases have known domain annotations that are detailed below.


Mouse   121 GQEHSDSEKASASLPGGSPEDGS---LKKKQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIA 182
            |....::....||..|.:.:|.:   ||:|.:|.||.||:.|:..||..|:|..|||:..||.:|
  Fly   441 GSGEGENSNGGASNIGNTEDDQARLILKRKLQRNRTSFTNDQIDSLEKEFERTHYPDVFARERLA 505

Mouse   183 VWTNLTEARVRVWFKNRRAKWRKRE--RSQQ-------------------------------AEL 214
            ....|.|||::|||.|||||||:.|  |:|:                               :.|
  Fly   506 GKIGLPEARIQVWFSNRRAKWRREEKLRNQRRTPNSTGASATSSSTSATASLTDSPNSLSACSSL 570

Mouse   215 CKG-----------GFAAP-----------LGGLVPPYEEVYP---------------------- 235
            ..|           |.::|           ||..:...|...|                      
  Fly   571 LSGSAGGPSVSTINGLSSPSTLSTNVNAPTLGAGIDSSESPTPIPHIRPSCTSDNDNGRQSEDCR 635

Mouse   236 ----------------------GYSYGNWPPKALAPPLAAKTFPF-------------------- 258
                                  |::.|:....|::|.|...:..|                    
  Fly   636 RVCSPCPLGVGGHQNTHHIQSNGHAQGHALVPAISPRLNFNSGSFGAMYSNMHHTALSMSDSYGA 700

Mouse   259 -----AFNSVNVGPLASQPVFSPPSSI--AASMVPS--------------AAAAPGTVPGPG--- 299
                 :||...|||||      |||.|  ...:.||              |.|....|||.|   
  Fly   701 VTPIPSFNHSAVGPLA------PPSPIPQQGDLTPSSLYPCHMTLRPPPMAPAHHHIVPGDGGRP 759

Mouse   300 ALQGLG-------GA---------------PPGLAPAAVSSGAVSCPYASAAAAAAAAASSPYVY 342
            |..|||       ||               ||   |...||.|....:::|::|:|.......:.
  Fly   760 AGVGLGSGQSANLGASCSGSGYEVLSAYALPP---PPMASSSAADSSFSAASSASANVTPHHTIA 821

Mouse   343 RDPCNSSLASLRLKAKQHAS--FSYPAVPGPPPAANLS 378
            ::.|.|..:|.......|:|  .|.|..|.....|::|
  Fly   822 QESCPSPCSSASHFGVAHSSGFSSDPISPAVSSYAHMS 859

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pitx3XP_006526827.1 Homeobox 152..205 CDD:365835 28/52 (54%)
PTZ00395 <228..>322 CDD:185594 39/203 (19%)
OAR 344..361 CDD:367680 3/16 (19%)
eyNP_001014693.1 PAX 98..221 CDD:128645
Homeobox 475..527 CDD:278475 27/51 (53%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6207
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.940

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